Perognathus longimembris pacificus (Pacific pocket mouse): 125346829
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Entry
125346829 CDS
T08928
Symbol
Rapgef5
Name
(RefSeq) rap guanine nucleotide exchange factor 5 isoform X1
KO
K08019
Rap guanine nucleotide exchange factor 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04014
Ras signaling pathway
plop04015
Rap1 signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
125346829 (Rapgef5)
04015 Rap1 signaling pathway
125346829 (Rapgef5)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
RasGEF_N
RA
RA_2
DUF6382
SNX17-27-31_F1_FERM
Peptidase_C58
Motif
Other DBs
NCBI-GeneID:
125346829
NCBI-ProteinID:
XP_048195666
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Position
2:89209702..89442159
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AA seq
884 aa
AA seq
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MRMAVGSVKMQPPCESPALAAVAAVAAADGALRRSPSARDPERETPAASLRPRLKDLPAL
LRSGLTLRRKRSAAGGRTLSRRISNPYLEHAPSQIYGENSSCAGRALRNIIIVQAADLVK
DRVNLKGFYRRSCVGSELVDWLLEHCPFVQCRSMAIGVWQLLLDMGIMSSVDQHLYFQDT
YVFYQFSSDECSYLYCEFEREEEWQNGVKLLLQLVPLIPARAGICDLSHQKIEDPEESSD
EILARLTSAVQRELAAVIALKARKSAVEQDEESSGRDVAVAKAESVPDSQAGVMCKLQER
DDIGRIELVQKLARENCQFLQTDKKELEKSEHQEDEVTTVQVKEQDQNVLVLKKVLGCGP
APTAGSAEADGRYVVVSGTPEKILEHLLNDLHLEEVQDKETETLLDDFLLTYTVFMTTDD
LCQALLRHYSAKKYQGKEENSEAPCRKRKVLHLVSQWIALYKDWLHEDEHSKMFLKTIYR
NVLDDVYEYPILEKELKEFQKILGMHRRHTVDEYSPQRKNKALFHQFSLKENWLQHRGTV
AETEEIFCHVYITEHSYVSVKAKVSSTAREILKVVAEKIQHAEEDLALVAILLSGEKHVL
QPNDLAVTKSLEASSRICVYRKDLADTLNPFAENEESQQRSMRILGMNTWDLALELMNFD
WSLFNSIHEQELIYFTFSRQGNGEHTVNLSLLLQRCNEVQLWVATEILLCSQLGKRVQLV
KKFIKIAAHCKAQRNLNSFFAIVMGLNTASVSRLSQTWEKIPGKFKKLFSELESLTDPSL
NHKAYRDAFKKMKPPKIPFMPLLLKDVTFIHEGNKTFLDNLVNFEKLHMIADTVRTLRHC
RANQFGGDVSPKEHQELKSYVTHLYVIDSQQALFELSHRLEPRA
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggccgtaggctccgtcaagatgcagcccccgtgcgagagcccggccctggcc
gcggtggcggccgtggcggcggcggacggcgccctgcgccgcagccccagcgcccgggat
cccgagcgcgagacgcccgcggcgtcgctgcggccgcgcctgaaggacctgccggcgttg
ctgcggagcgggctcacgctgcggaggaagcggagcgccgccgggggccggactctatcg
aggaggatttccaatccataccttgaacatgctccttcacagatttatggggagaattca
tcgtgtgcaggaagagcgttgaggaatattattatcgttcaggcagctgacctggtaaag
gacagagtgaacctcaaggggttttacaggagaagctgtgtggggtcggagctcgtggac
tggcttctggaacactgtccttttgtccagtgcagatctatggccattggtgtctggcag
ctcctgctggacatgggaattatgtcatcagtggaccagcatctgtactttcaagatact
tatgttttctaccaattttcatcggatgaatgcagctacttgtactgtgaatttgaaagg
gaagaagaatggcaaaatggtgtcaagctcttgctgcaacttgtgcctctaattccagca
agggcaggcatctgtgacctgtctcatcagaaaattgaagaccccgaagaaagcagtgat
gaaattcttgctcggttaacatctgcggttcaaagagaactagcagctgttattgctttg
aaagcaaggaagtctgcagttgaacaggatgaagaaagtagtggcagggacgttgctgtg
gctaaagcggaaagtgttccagattctcaggccggagtgatgtgcaagcttcaagagaga
gatgatatcggacgcattgaactggtacaaaagttggcaagagaaaattgtcagtttctg
cagactgacaaaaaagaactggagaagtctgaacaccaggaggatgaagtgacgacggtg
caggttaaagagcaagaccagaatgtcctggtgctgaagaaagtgctgggctgtggccca
gcccccaccgctgggagtgccgaggccgatgggagatacgtggtggtgtctgggaccccg
gagaagatcttggagcaccttttgaatgacttgcacctggaggaggtccaggacaaagaa
acagagacccttcttgatgatttcctcctcacgtacacagtcttcatgacaactgatgac
ttgtgccaggcgctgttaagacattattctgctaagaaatatcaaggtaaggaagaaaat
tcagaggcaccatgtcggaaacgtaaagtcttacatcttgtttcccagtggattgctctg
tacaaagactggctccatgaagatgaacattcaaaaatgtttttaaagaccatctacaga
aatgtactggatgatgtctatgaatatcccatactggaaaaagaattgaaagaatttcag
aagatactgggaatgcatcgccggcacacagtggatgagtattcaccacagaggaagaat
aaagcccttttccaccaattcagtcttaaggagaactggctccaacatagaggaactgtg
gctgaaacagaggaaattttttgtcatgtgtatataacggagcactcctatgtcagtgtg
aaagcaaaagtttccagtacagcccgagagatcctgaaagtcgtggcagaaaagattcag
catgcagaagaggatctggctctggtggccatcctgctctctggggaaaagcatgtgctt
cagccaaatgacttggctgtcaccaaatctttggaggcgtctagtcggatctgtgtctac
cggaaggacctggctgatacattgaacccatttgcagaaaatgaggaatcacagcaaagg
tcgatgaggattttgggaatgaacacttgggatcttgctctggaattaatgaattttgat
tggagtctgttcaattcaattcatgagcaagagctgatctacttcaccttcagcagacaa
ggaaatggggagcacactgtgaacctcagccttttgctccagagatgcaatgaagtccag
ctctgggtggccacggagattctgctttgcagccagctgggcaagcgagtgcagctggtg
aaaaaattcatcaaaattgcagcgcactgcaaagcccagcgaaatctgaactctttcttt
gctattgtgatgggtctcaacactgcctctgtcagccggctgtcacagacctgggagaaa
atccctgggaagtttaagaaacttttctctgaacttgaaagtttgacagatccttcccta
aatcacaaagcctacagagatgcattcaaaaagatgaagccaccaaaaatcccattcatg
cccttactacttaaagatgtaacatttattcatgaaggaaataaaacatttctggataat
cttgtcaattttgaaaaactgcacatgatcgcagacaccgtcagaaccctgagacactgc
agggctaaccagttcggaggcgatgtgtctccaaaggagcaccaagagctgaagtcctac
gtcacccacctctacgtcattgacagccagcaggccctgttcgagctctcccacaggctg
gagccccgagcctga
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