Perognathus longimembris pacificus (Pacific pocket mouse): 125347112
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Entry
125347112 CDS
T08928
Symbol
Flnc
Name
(RefSeq) filamin-C isoform X1
KO
K27393
filamin-C
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125347112 (Flnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125347112 (Flnc)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125347112 (Flnc)
Intermediate filaments
Intermediate filament-binding proteins
125347112 (Flnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
CH
Big_3_5
CFSR
Invasin_D3
CH_2
Motif
Other DBs
NCBI-GeneID:
125347112
NCBI-ProteinID:
XP_048196141
LinkDB
All DBs
Position
2:135367196..135396930
Genome browser
AA seq
2726 aa
AA seq
DB search
MMNNSGYSDAAGLGLGDEADEMPSTEKDLAEDAPWKKIQQNTFTRWCNEHLKCVGKRLTD
LQRDLSDGLRLIALLEVLSQKRMYRKFHPRPNFRQMKLENVSVALEFLEREHIKLVSIDS
KAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDARKQTPKQRLLGWIQNKVPQLPIT
NFNRDWQDGKALGALVDNCAPGLCPDWEAWDPNQPVQNAREAMQQADDWLGVPQVIAPEE
IVDPNVDEHSVMTYLSQFPKAKLKPGAPVRSKQLNPKKAIAYGPGIEPQGNTVLQPAHFT
VQTVDAGMGEVLVYIEDPEGHTEEAKVVPNNDKDRTYAVSYVPKVAGLHKVTVLFAGQNI
ERSPFEVNVGMALGDANKVSARGPGLEPVGNVANKPTYFDIYTAGAGTGDVAVVIVDPQG
RQDTVEVALEDKGDSTFRCTYRPVMEGPHTVHVAFAGAPITRSPFPVHVAEACNPNACRA
SGRGLQPKGVRVKEVADFKVFTKGAGSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYP
VVPGKYVVTITWGGYAIPRSPFEVQVSPEAGTQKVRAWGPGLETGQVGKSADFVVEAIGT
EVGTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQ
PAPPDCFPDKVKAFGPGLEPTGCIVDRPAEFTIDARAAGKGDLKLYAQDADGCPIDIKVI
PNGDGTFRCSYVPTKPIKHTIIISWGGVNVPKSPFRVNVGEGSHPERVKVYGPGVEKTGL
KANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAG
HYTIMVLFANQEIPASPFHIKVDPSHDASKVKAEGPGLNRTGVEVGKPTHFTVLTKGAGK
AKLDVHFAGAAKGEAVRDFEIIDNHDYSYTVKYTAVQQGNMAVTVTYGGDPVPKSPFVVN
VAPPLDLSKVKVQGLNSKVAVGQEQAFSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGG
GAEAQAVRYMPPEEGPYKVDITYDGHPVPGSPFAVEGVLPPDPSKVCAYGPGLKGGLVGT
PAPFSIDTKGAGTGGLGLTVEGPCEAKIECQDNGDGSCAVSYLPTEPGEYTINILFAEAH
IPGSPFKATIQPVFDPSKVRASGPGLERGKAGEAATFTVDCSEAGEAELTIEILSDAGVK
AEVLIHNNADGTYHITYSPAFPGTYTITIKYGGHPIPKFPTRVHVQPAVDTSGVKVSGPG
VEPHGVLREVTTEFTVDARSLTATGGNHVTARVLNPSGAKTDTYVTDNGDGTYRVQYTAY
EEGVHLVEVLYDEVAVPKSPFRVGVTEGCDPTRVRAFGPGLEGGLVNKANRFTVETRGAG
TGGLGLAIEGPSEAKMSCKDNKDGSCTVEYIPFTPGDYDVNITFGGRPIPGSPFRVPVKD
VVDPGKVKCSGPGLGAGVRARVPQTFTVDCSQAGRAPLQVAVLGPTGVAEPVEVRDNGDG
THTVNYTPATDGPYTVGVKYADQEVPRSPFKIKVLPAHDASKVRASGPGLNASGIPASLP
VEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGD
EIPYSPFRIHALPTGDASKCLVTVSIGGHGLGACLGPRIQIGEETVITVDAKAAGKGKVT
CTVSTPDGAELDVDVVENHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVLACDPLP
RVEEPAEVLQLRQPYTPPRPGTCPPHWATEEPVVPLEPLESMLRPFNLVIPFTVQKGELT
GEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINS
RHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSYL
PTAPGDYSIIVRFDDKHIPGSPFTAKITGDDSMRTSQLNVGTSTDVSLKITESDLSQLTA
SIRAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHVVSVRKSGKHVTNSPFKILVGPSEIG
DASKVRVWGKGLSEGHTFQVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDMEDGTCKVT
YCPTEPGTYIINIKFADKHVPGSPFTVKVTGEGRMKESITRRRQAPSIATIGSTCDLNLK
IPGNWFQMVSAQERLTRTFTRSSHTYTRTERTEISKTRGGETKREVRVEESTQVGGDPFP
AVFGDFLGRERLGSFGSITRQQEGEASSQDMTAQVTSPSGKTEAAEIVEGEDSAYSVRFV
PQEMGPHTVAVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLERGVAGMPAEFSIWT
REAGAGGLSIAVEGPSKAEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVV
PVASLSDDARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDARVHTPSGAVEECYVSEL
DSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQAGDPGLVSAYGPGLEGGT
TGVSSEFIVNTLNAGSGALSVTIDGPSKVQLDCRECPEGHVVTYTPMAPGNYLIAIKYGG
PQHIVGSPFKAKVTGPRLSGGHSLHETSTVLVETVTKSSSSRGSSYSSIPKFSSDASKVV
TRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVK
EKGDYILIVKWGDESVPGSPFKVNVP
NT seq
8181 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaacagtggctactcggatgccgccggccttggcctgggcgacgaggcggac
gagatgccgtccaccgagaaggacctggctgaggacgcgccgtggaagaagatccagcag
aacacgttcacgcgctggtgcaacgagcacctcaagtgcgtgggcaagcgcctgaccgac
ctgcagcgcgacctcagcgacgggctgcgcctcatcgcgctgctcgaggtgctcagccag
aagcgcatgtaccgcaagttccacccgcgccccaacttccgccagatgaagctggagaac
gtatccgtggccctcgagttcctggagcgcgagcacatcaagctcgtgtccatcgacagc
aaggccattgtggatgggaacctgaagctgattctaggcctgatctggacactgattctg
cactactccatctctatgcccatgtgggaggatgaggatgatgaagatgcccgcaaacag
acacccaaacagcgtctgcttggctggatccagaacaaggtgccccagctgcccatcacc
aacttcaatcgggactggcaggatggcaaggctctgggtgccctggtagacaactgtgcc
cccggtctctgccctgactgggaggcctgggaccccaaccagcctgtgcagaacgcccgg
gaggccatgcaacaagccgatgactggctcggggtgccccaggtgattgcccctgaggag
attgtggatcccaatgtggatgaacattctgtgatgacatacctgtcccagttccccaag
gccaagctcaaacccggtgcccctgttcgctccaagcagctgaatcccaagaaagccatc
gcctatgggcctggcatcgaaccccaaggcaacaccgtactccagcctgcccacttcacc
gtgcagacggtggatgccggtatgggcgaggtgctggtctacattgaggaccctgagggc
cacactgaggaggccaaggtggttcccaacaatgacaaggaccgcacatatgccgtttcc
tatgtgcccaaagttgctgggttacacaaggtgactgtgctgtttgctggccagaatatt
gaacgtagcccctttgaggtgaatgtgggcatggccctgggagatgccaacaaggtgtca
gctcgtgggcctggcttggagccagtggggaatgtggccaacaaacccacctactttgat
atctacactgcaggggctggcactggtgatgttgccgtggtgatcgtggacccacagggc
cggcaggacaccgtggaggtagccctggaggacaagggcgacagcacattccgttgcaca
tacaggcctgtgatggagggaccacacacagttcatgtggcctttgccggtgcccccatc
acccgcagtcctttccccgtccatgtggctgaagcctgtaaccccaatgcctgccgtgcc
tctgggcgaggcctacagcctaaaggtgtgcgtgtgaaagaggtagctgactttaaggtg
ttcaccaagggtgccggcagcggggagctcaaggtcacagtcaaggggccaaagggcaca
gaggagccggtgaaggtgcgggaagctggagatggtgtgtttgagtgtgaatactatccc
gtggtgcctgggaaatacgtggtgaccattacatggggcggctatgccatcccccgaagt
ccctttgaggtccaggtgagcccagaggcgggaacccagaaagtgcgggcctggggccct
ggtttggagactggccaagtgggcaagtcagctgactttgtggtggaggccattggcaca
gaagtggggactctgggcttctccattgaggggccatcacaggccaagatcgagtgtgat
gacaagggtgatggctcttgtgacgtgcggtattggcccacggagcctggggagtacgcc
gtgcatgtcatctgtgatgacgaggatatccgtgactcacccttcatcgcgcacattcag
ccagccccgccagattgcttcccagacaaggtgaaggcttttgggcctgggttggaaccc
actggctgcatcgtggacaggcctgctgagttcaccatcgatgcccgggctgccggcaaa
ggagacctgaaactctatgctcaggatgcagatggctgccccatcgacatcaaggtgatc
cccaatggcgatggcactttccgctgctcctatgtgcccaccaagcccattaagcatacc
atcatcatctcctggggaggtgtcaacgtacccaagagccccttcagggtgaatgtggga
gaaggcagccaccccgagcgggtgaaggtgtatggtcctggtgttgagaagacaggcctc
aaggccaacgagcccacctatttcacagtcgactgcagcgaggcagggcaaggtgatgtg
agcattggcatcaagtgtgccccaggtgtggtgggccctgccgaggctgacatcgacttc
gacattatcaagaatgacaatgacaccttcacagtcaagtacactcctccaggggctggc
cactacaccatcatggtgctctttgctaaccaggagatccctgccagccccttccacatc
aaggtagacccatctcatgatgccagcaaggtgaaggctgagggccctgggctgaaccgt
acaggtgtggaagtcgggaagcccactcacttcaccgtgctgaccaagggggccggcaag
gccaagttggatgtgcactttgctggggcagccaagggggaggccgtgcgggactttgaa
atcatcgacaaccatgactactcctacactgtcaagtacactgctgtccagcagggtaac
atggcagtgacagtgacttatggtggagaccccgtccccaaaagcccctttgtggtcaat
gtggcacccccactcgacctcagcaaagtcaaagttcaaggcctcaacagcaaggtggct
gtgggtcaggaacaggcattctcggtgaacacacgaggggctggtggccaggggcagctg
gatgtgaggatgacctcaccttctcgacggccaatcccctgcaagctggagccagggggt
ggagctgaagcccaagctgtgcgctacatgccccctgaggaggggccctacaaagtggac
atcacctatgatggccacccggtacctggcagcccatttgctgtggaaggtgttctgcct
cctgacccctccaaggtctgtgcttatggccctggtctcaaaggagggcttgtgggcacc
cctgcacccttctccattgacaccaagggggctggcacagggggtctggggttgaccgtg
gagggcccctgcgaggccaagattgagtgccaggacaatggtgatggctcctgcgctgtc
agctacctgcccacagagccgggcgagtacaccatcaacatcctgtttgctgaagcccac
atccccggctcacccttcaaggctaccatccagcctgtgttcgacccaagcaaggtgcgg
gccagtgggccaggcctagagcgcggcaaggctggggaggcagccacattcactgtggac
tgctccgaagcgggtgaggcggagctgaccattgagatcctatccgacgctggtgtcaag
gctgaggtgctgatccacaacaacgccgatggcacctaccacatcacctacagccctgcg
tttcccggcacctacaccatcaccatcaaatatggcggccaccccatacccaaattccct
acccgtgttcacgtgcagccagctgttgataccagtggggtcaaggtctcggggcctggt
gtggagccacacggcgtcctgcgggaggtgaccaccgagttcactgtggatgcaaggtcc
ctaacagccacgggtggcaaccatgtgacagctcgtgtgctcaacccctcgggagctaag
acagacacctatgtgacagacaatggggacggcacctaccgtgtgcagtacacagcctat
gaagagggtgtgcatttggtggaggtgctgtatgatgaggtagctgtgcccaagagcccc
ttccgggtgggcgtgactgagggctgtgatcccacccgagtccgggcctttgggccaggc
ctggagggtggcttggtcaacaaggccaaccgcttcactgtggaaaccaggggagctggc
accgggggcctaggcctggccattgagggcccctcagaagccaagatgtcctgcaaggac
aacaaggatggcagctgcactgtggagtacatccctttcacccctggagactatgacgtc
aacatcacctttggggggcggcccatcccagggagtccattccgagtgccagtgaaggat
gtggtggatcctgggaaagtaaagtgttccggaccagggctgggggccggcgtcagagca
cgggtaccccagacctttacagtggactgcagtcaagctggccgggcccccctgcaggtg
gctgtgctgggccccacaggcgtggctgagcctgtggaggtacgtgataatggggatggc
acccacactgtcaactacacccctgccacggatggaccctacacagtaggtgtcaagtat
gctgaccaggaggtgccgcgcagccctttcaagatcaaagtgcttccagcccatgatgcc
agcaaggtgcgggcgagcggccctggcctcaatgcctctggcatccctgccagcctgcct
gttgagttcaccattgatgctcgggatgctggagagggacttctcactgtccagatcctg
gaccctgagggtaaacccaagaaagccaacatccgagacaatggggatggcacatacact
gtgtcctacctgccagacatgagtggccgatacaccatcaccatcaagtatggcggcgat
gagatcccctactcacccttccgcatccatgccctgcccactggggatgccagcaagtgc
cttgtcacagtgtccattggaggccatggcctaggtgcctgtctgggtccccgaatccaa
atcggagaggagactgtgatcacagtggatgccaaggcagcaggcaaggggaaggtgacc
tgcacagtgtctacaccagacggagcggaactggatgtggatgtggttgagaaccatgat
ggcacctttgacatctactacacagcacctgagccggggaaatatgtcatcaccatccgc
tttgggggcgaacacatccccaacagtcccttccatgtgttggcgtgtgaccccctgccc
cgtgtggaggagcctgctgaagtactacagctgcgccagccctacacccctccccggcct
ggcacctgccccccacactgggccacagaggaacccgtggtgcccttggagcctttggag
tccatgctgaggcccttcaacctggtcatccccttcactgtgcagaaaggggaactcaca
ggagaggtgcggatgccctctgggaagactgcccgacccaacattaccgacaacaaggat
ggcaccatcacggtgagatacgcacccactgagaagggcctgcaccagatgggcatcaag
tacgatggcaaccacatccctgggagccccctgcagttctatgtggatgccatcaatagc
cgccacgtcagtgcctacggaccaggcctgagccatggcatggtcaataagccagctacc
tttaccatcgtcaccaaggatgctggggaagggggtctgtcactggctgtggagggccca
tccaaggcagagatcacctgcaaggacaacaaggatggtacctgcaccgtgtcctacctg
cccacagcacctggagactacagcatcattgttcgttttgatgacaagcacatcccagga
agccccttcacagccaagatcacaggtgatgactccatgagaacctcgcagctgaatgtg
ggcacttccaccgatgtgtcgctgaagatcaccgaaagtgacctgagccagctgacggcc
agcatccgtgccccctcgggcaatgaggagccctgtctgctgaagcggctgcctaaccgg
cacattgggatctccttcacccccaaggaggttggggaacacgtggtgagcgtgcgtaaa
agtggcaagcacgtcaccaacagccccttcaagatcttggtggggccatcagagatcggg
gatgccagcaaagttcgagtctggggcaagggcctttctgaaggccacaccttccaggtg
gcagagttcatcgtggacactcggaatgcaggttatgggggcctagggttgagtattgaa
ggccctagcaaagtggacatcaactgtgaggacatggaggatggcacgtgtaaagtcacc
tactgccccacggagcctggcacctacatcatcaacatcaagtttgctgacaagcatgtg
cctggaagccccttcaccgtgaaggtgacaggtgagggccgcatgaaggaaagcatcacc
cgccgtaggcaggcaccctccattgccaccatcggtagcacctgtgacctcaacctcaag
atcccagggaactggttccagatggtgtctgcccaggagcggctgacacgcaccttcaca
cgcagcagccacacatacacccgcaccgagaggacggagatcagcaagactcggggtggg
gagaccaaacgcgaggtgcgcgtggaggagtccacccaggttggcggggaccccttccct
gctgttttcggggacttcctgggccgggagcgcctgggctccttcggcagcatcactcgg
cagcaggagggtgaggccagctctcaggacatgaccgcacaggtgaccagcccatcaggc
aagacagaagctgcggagatcgtggaaggagaggacagcgcatacagtgtgcgctttgtg
ccccaggagatggggccccacaccgtcgctgtcaagtaccgtggccagcacgtacctggc
agccccttccagttcactgtggggccactgggtgaagggggtgcccacaaagtgagggct
ggaggcacaggcctggagcgaggtgtggctggcatgccagctgagttcagcatctggacc
cgagaagcaggtgccgggggtctgtccattgctgtggagggtcccagcaaggccgagatt
gcatttgaggaccgcaaagatggctcctgtggtgtctcctatgttgtgcaggagccaggt
gactatgaagtgtccatcaagttcaacgatgagcacatccccgacagcccatttgtggtc
ccggtggcctccctctcggatgacgctcgccggctgacagtcaccagtctccaggagaca
gggctcaaggtgaaccagccagcgtcctttgcggtgcagctgaacggagctcggggcgtg
attgatgctagggtgcacacgccctcaggagccgtggaggagtgctatgtctctgagctg
gacagtgacaaacataccatccgattcatcccccatgagaatggcgtccactctatcgat
gtcaagttcaatggtgcccatatcccaggaagccctttcaaaatacgtgttggggaacag
agccaggctggggacccaggcttggtgtcagcctatggccctgggctcgagggaggcacc
actggtgtgtcatcggagttcatcgtaaacaccctgaatgccggctcaggggccttgtct
gtcaccattgatggtccctccaaggtgcagctggactgtcgggagtgtcctgagggtcac
gtggtcacttatactcccatggctcctggcaactacctcattgccatcaagtacggtggc
ccccagcacattgtaggcagtcctttcaaagccaaggttacaggtcccaggctgtctgga
ggccatagccttcacgaaacatccacggttctggtggagactgtgaccaagtcctcctcc
agccggggctccagctacagctccatccccaagttctcctccgatgccagcaaggtggtg
acgcgaggccccgggctatcccaggcctttgtgggtcagaagaactccttcactgtggac
tgcagcaaagcaggcaccaacatgatgatggtgggtgtgcacgggcccaagaccccctgt
gaggaggtatatgtgaagcacatggggaaccgtgtgtacaatgtcacctacactgtcaag
gagaaaggggactatatcctcattgtcaagtggggtgacgaaagtgtccccggaagccct
ttcaaagtcaatgtgccctga
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integrated database retrieval system
