Perognathus longimembris pacificus (Pacific pocket mouse): 125347939
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Entry
125347939 CDS
T08928
Name
(RefSeq) CD209 antigen-like protein C
KO
K06563
C-type lectin domain family 4 member L/M
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03260
Virion - Human immunodeficiency virus
plop03264
Virion - Flavivirus and Alphavirus
plop03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
plop03273
Virion - Lassa virus and SFTS virus
plop04145
Phagosome
plop04625
C-type lectin receptor signaling pathway
plop05152
Tuberculosis
plop05162
Measles
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
125347939
03264 Virion - Flavivirus and Alphavirus
125347939
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
125347939
03273 Virion - Lassa virus and SFTS virus
125347939
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125347939
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125347939
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
125347939
09171 Infectious disease: bacterial
05152 Tuberculosis
125347939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125347939
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
plop04054
]
125347939
04515 Cell adhesion molecules [BR:
plop04515
]
125347939
04090 CD molecules [BR:
plop04090
]
125347939
04091 Lectins [BR:
plop04091
]
125347939
Membrane trafficking [BR:
plop04131
]
Endocytosis
Phagocytosis
C-lectin receptors
125347939
Pattern recognition receptors [BR:
plop04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
125347939
Cell adhesion molecules [BR:
plop04515
]
Lectins
Selectins and C-type lectins
125347939
CD molecules [BR:
plop04090
]
Proteins
125347939
Lectins [BR:
plop04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
125347939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
SHE3
GSAP-16
Forkhead
Motif
Other DBs
NCBI-GeneID:
125347939
NCBI-ProteinID:
XP_048196827
LinkDB
All DBs
Position
3:69889950..69894739
Genome browser
AA seq
263 aa
AA seq
DB search
MSDSQAVKGSQLSPLEEDQAMVTTGYSFKRWTFPPTSGFRSVAGCLGHRLAPLILQLLSF
IILAGLLLAVINQGSKLLGSQSQSEQELYQELTQLKTAMGSKLLGSQNQSEQELYQELTQ
LKVALDRLCRPCPWDWTSFQENCYFFSKSQRNWKNSIKACLDMEAQLVVIETEEEQSFLQ
QTSKNRGQTWMGLSDLNEEATWKWVNGLPLLHSFHKYWNKGEPNNADEEDCAEFTGNGWN
DAKCDNRNFWICKKSSSICSSSD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactctcaggctgtgaagggatcacagttgagcccactggaggaggaccaggca
atggtcaccactggctattcctttaaaagatggactttcccacccacttctggattccgt
agtgtggcaggttgtctgggacatcgcctcgcccccctcatcctacagctgctgtccttt
atcatcttggctgggctgctgctggccgtcatcaaccaaggctccaaacttcttggctct
caaagtcaatcagagcaggagctctaccaggaactaacccagctgaagactgccatggga
tccaaacttctcggctctcagaaccaatcagaacaggagctctaccaggaactgacccag
ctgaaggttgcactggaccgcctgtgccggccctgcccctgggactggacatccttccaa
gaaaactgttacttcttctccaagtcccaaaggaactggaaaaactctatcaaggcctgc
ctggatatggaggcccaactggtggtcattgaaactgaggaggagcagagctttctgcag
cagacatcaaagaatagaggccagacgtggatgggactgtcagacctgaatgaagaagcc
acgtggaagtgggtgaatggcttgcctctgttacacagcttccataagtattggaacaaa
ggggagcccaacaacgctgatgaagaagactgtgcggagttcaccggcaatggctggaat
gacgccaagtgtgacaatagaaacttctggatctgtaaaaagtcttcctccatctgctcc
tccagcgactga
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