KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125348277
Entry
125348277         CDS       T08928                                 
Symbol
Rb1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
  KO
K06618  retinoblastoma-associated protein
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01522  Endocrine resistance
plop04110  Cell cycle
plop04218  Cellular senescence
plop04934  Cushing syndrome
plop05160  Hepatitis C
plop05161  Hepatitis B
plop05163  Human cytomegalovirus infection
plop05165  Human papillomavirus infection
plop05166  Human T-cell leukemia virus 1 infection
plop05167  Kaposi sarcoma-associated herpesvirus infection
plop05169  Epstein-Barr virus infection
plop05200  Pathways in cancer
plop05203  Viral carcinogenesis
plop05207  Chemical carcinogenesis - receptor activation
plop05212  Pancreatic cancer
plop05214  Glioma
plop05215  Prostate cancer
plop05218  Melanoma
plop05219  Bladder cancer
plop05220  Chronic myeloid leukemia
plop05222  Small cell lung cancer
plop05223  Non-small cell lung cancer
plop05224  Breast cancer
plop05225  Hepatocellular carcinoma
plop05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:plop00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    125348277 (Rb1)
   04218 Cellular senescence
    125348277 (Rb1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125348277 (Rb1)
   05207 Chemical carcinogenesis - receptor activation
    125348277 (Rb1)
   05203 Viral carcinogenesis
    125348277 (Rb1)
  09162 Cancer: specific types
   05212 Pancreatic cancer
    125348277 (Rb1)
   05225 Hepatocellular carcinoma
    125348277 (Rb1)
   05226 Gastric cancer
    125348277 (Rb1)
   05214 Glioma
    125348277 (Rb1)
   05220 Chronic myeloid leukemia
    125348277 (Rb1)
   05218 Melanoma
    125348277 (Rb1)
   05219 Bladder cancer
    125348277 (Rb1)
   05215 Prostate cancer
    125348277 (Rb1)
   05224 Breast cancer
    125348277 (Rb1)
   05222 Small cell lung cancer
    125348277 (Rb1)
   05223 Non-small cell lung cancer
    125348277 (Rb1)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    125348277 (Rb1)
   05161 Hepatitis B
    125348277 (Rb1)
   05160 Hepatitis C
    125348277 (Rb1)
   05163 Human cytomegalovirus infection
    125348277 (Rb1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    125348277 (Rb1)
   05169 Epstein-Barr virus infection
    125348277 (Rb1)
   05165 Human papillomavirus infection
    125348277 (Rb1)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    125348277 (Rb1)
  09176 Drug resistance: antineoplastic
   01522 Endocrine resistance
    125348277 (Rb1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:plop01009]
    125348277 (Rb1)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:plop03000]
    125348277 (Rb1)
Protein phosphatases and associated proteins [BR:plop01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125348277 (Rb1)
Transcription factors [BR:plop03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    125348277 (Rb1)
SSDB
Motif
Pfam: Rb_C RB_A RB_B DUF3452 RuvC_1 TFIIB
Other DBs
NCBI-GeneID: 125348277
NCBI-ProteinID: XP_048197330
LinkDB
Position
3:42539445..42673253
AA seq 923 aa
MPPKHPRRAAVTAVEPPAPPPPPPAEDPEPDSGPEDLPLARLEFEEMEEPDFTALCQKLK
IPDHVRERAWLTWEKVSSVDGVLEGYIQKKKEFWGICIFIAAVDLDEMPFTFTELQKNIE
TSVYKFFDLLKEIDTSTKVDNAMSRLMKKYNVLCALYSKLERTCELIYLTQPSNSLSTEI
SSLFVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYKTAVIP
TNGSPRTPRRGQNRSARVAKQLENDTRIIEVLCKEHECNIDEVKNVYFENFIPFMNSLGI
VTSNGLPEVESLSKRYEEIYLKNKDLDARLFLDHDQTLQTDPIDSFEMQRTPRKCNPDEE
VNVIPPHTPVRTVMNTIQQLMMILNSASDQPSENLIAYFNNCTVNPRENILKRVNNIGHI
FKEKFAKAVGQGCAEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMS
LLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLELKAFDFYKVIESFIKAEANLTRE
MIKHLERCEHQIMESLAWLSDSPLFDLIKQSKDREGPPDHVESTCPLNLPLQNNHTAADM
YLSPLRSPKKKGSTTRVNSTANAETQATSAFQTQKPSKSTSLSLFYKKVYRLAYLRLNTL
CARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIV
TAYKDLPHAVQETFKRVLIRDEEYDSIIVFYNSVFMQRLKTNILQYASTRPPTLSPIPHI
PRSPYKFSSSPLRVPGGNIYISPLKSPYKISEGLPTPTKMTPRSRILVSIGESFGTSEKF
HKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIEGSDESDGSKHLPGESKFQQKLAEMT
STRTRMQKQKMNESMDALNKEEK
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgccgcccaaacacccccggagagcggcggtcaccgccgtcgagcccccagcgcccccg
ccaccgccgcccgcggaggacccggagccagacagcggccccgaggacttgccgctggcc
aggcttgagttcgaagaaatggaagaacctgattttactgcattatgtcagaaattaaag
ataccagatcatgtcagagaaagagcttggttaacttgggagaaagtttcttctgtggat
ggagtattggaaggttatattcaaaagaaaaaggagttctggggaatctgtattttcatt
gctgcagttgacctagatgagatgcccttcacttttactgagctacagaaaaacatagaa
accagtgtctacaaattctttgacttactaaaagaaattgataccagtactaaagttgat
aatgctatgtcaagactgatgaagaagtataatgtattgtgtgcactctacagcaaatta
gaaagaacatgtgaactcatatatttgactcaacccagcaattcgttatctactgagata
agttctctgtttgtcctgaaagtttcttggatcacatttttactagctaaaggtgaagta
ctgcaaatggaagatgatttggtaatctcatttcaattaatgctgtgtgtgctagactat
tttatcaagctatcacctcctgcattactcaaagaaccatataaaacagcggtaatacct
actaatggttcaccacgaacacccaggcgaggtcagaacagaagtgcacgggtagcaaaa
caactagaaaatgatacaagaattattgaagttctctgtaaagaacatgagtgtaatata
gatgaggttaaaaatgtttattttgaaaattttataccatttatgaactcccttggaatt
gtaacttctaatggacttccagaggttgaaagtctctctaaacgatatgaagaaatttat
ctcaaaaataaagatcttgatgcacgattatttttggatcacgatcaaactcttcagact
gatcctatagacagttttgagatgcagagaacaccacgaaaatgtaacccagatgaagaa
gtgaatgtgattcctccacatactccagttaggactgttatgaatactatacagcagtta
atgatgattttaaattcagcaagtgatcaaccatctgaaaatctgattgcctatttcaat
aactgcacagtgaatccaagagaaaatatcctgaaaagagtgaacaatattggacacatc
tttaaagagaaatttgcgaaagccgtgggacaaggatgtgctgaaattgggtcacagcga
tataaacttggagttcgattgtattaccgagtgatggaatctatgcttaaatcagaagaa
gaacggctatccattcaaaattttagcaaactcctgaatgacaatatctttcatatgtct
ttattggcgtgtgctcttgaagttgtaatggctacatatagcagaagtacatctcagaat
cttgattctggaacagatttgtccttcccatggattctgaatgtacttgaattaaaagcc
tttgatttttacaaagtgattgaaagttttatcaaagcagaagctaatttgacaagagaa
atgattaaacatttagaaagatgtgaacatcaaatcatggaatctctggcatggctctca
gattcacccttatttgatcttattaaacaatcaaaggaccgagaaggaccaccggatcac
gttgaatctacttgtcctctcaacctccctctccaaaataatcacacagcagcagatatg
tatctttctcctttaagatctccaaagaaaaaaggttcaacaacacgtgtgaattctact
gcaaatgctgagacacaagcaacctcagcattccagactcagaagccatcgaaatctacc
tccctttcactcttttacaaaaaagtataccggctggcatatcttcgactaaatacccta
tgtgcgcgcctcctctctgaccacccagaactagagcacattatctggactctgttccaa
catacactgcaaaatgagtatgaactcatgagagacaggcatttggaccagattatgatg
tgttctatgtatggtatatgcaaagtgaagaatatagaccttaaattcaaaatcattgta
acagcatacaaagatcttcctcatgccgttcaggagacattcaaacgtgttttgatccga
gatgaggaatatgattccattatagtattctataactcagttttcatgcagagactgaaa
acaaatatcttacagtatgcttccaccaggcctcctaccttgtcaccaatacctcacatt
cctcgaagtccttacaagttttctagttcccccttacgggtccctggggggaacatctat
atatcacccctgaaaagtccatataaaatttcagaaggtctgccaacgccaactaaaatg
actccaagatcaagaattctagtgtcaattggtgaatcatttgggacttctgagaagttc
cacaaaataaatcagatggtatgtaacagcgaccgagtactcaaaagaagtgccgaagga
agtaaccctcctaaaccactgaaaaaactgcgctttgacattgaagggtcagatgaatcg
gatggaagtaaacatctcccaggggagtccaaatttcaacagaaactggcagaaatgacg
tctactcgaacacgaatgcaaaagcagaagatgaatgagagcatggatgccttgaacaag
gaggaaaagtga

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