Perognathus longimembris pacificus (Pacific pocket mouse): 125348726
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Entry
125348726 CDS
T08928
Symbol
Ldlr
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03272
Virion - Hepatitis viruses
plop04144
Endocytosis
plop04913
Ovarian steroidogenesis
plop04925
Aldosterone synthesis and secretion
plop04927
Cortisol synthesis and secretion
plop04934
Cushing syndrome
plop04976
Bile secretion
plop04979
Cholesterol metabolism
plop05145
Toxoplasmosis
plop05160
Hepatitis C
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125348726 (Ldlr)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125348726 (Ldlr)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
125348726 (Ldlr)
04925 Aldosterone synthesis and secretion
125348726 (Ldlr)
04927 Cortisol synthesis and secretion
125348726 (Ldlr)
09154 Digestive system
04976 Bile secretion
125348726 (Ldlr)
04979 Cholesterol metabolism
125348726 (Ldlr)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
125348726 (Ldlr)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
125348726 (Ldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125348726 (Ldlr)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
125348726 (Ldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125348726 (Ldlr)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125348726 (Ldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Vgb_lyase
hEGF
NBP1
Motif
Other DBs
NCBI-GeneID:
125348726
NCBI-ProteinID:
XP_048198183
LinkDB
All DBs
Position
3:72673805..72697161
Genome browser
AA seq
857 aa
AA seq
DB search
MRTWGAELLCAAALLLGAAGAAAQDTCSRNEFQCQDGKCISRRWICDGSPECPDGSDESR
ETCTSVTCKADDFSCGGLVNRCIPDSWRCDGQIDCQNGSDEQGCGPRTCSAGEFRCQDGR
CISQQFVCDGDRDCLDGADELACPARTCGPADFRCNSSACIPELWACDQDPDCDDGSDEW
PQRCGAAPAPPGPCAALEFHCGSGECVHISWRCDGGADCRDRSDEHACAVATCRPDEFRC
SDGSCVHGSRQCDGEYDCSDMSDELGCANVTLCEGPNKFKCHSGECIAMDKVCDSARDCR
DWSDEPIKECGTNECADNNGGCSHECQDLKIGHQCLCPNGFRLVDQHRCQDIDECQELDT
CSQRCVNLEGGYKCECETGFQMDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYVSLI
PNLKNVVALDTEVASNRIYWSDISQRKIYSTQIDRAPNASYNTILSVNLQAPDGLAVDWI
HGHIYWTDSVLGTVSVADTRGSKRKTLVQKSGSKPRAIVVDPVHGFMYWTDWGTPAKIEK
GGLNGMDVYSLVTEDIQWPNGITLDLASGRLYWVDSKLHSISSIDVNGGNRKIILEDEKR
LAHPFSLAIFEEKVFWTDIINEAIYSANRLTGSDVNLMAENLLSPEDIVLFHNITQPRGV
NWCERTALPNGGCQYLCLPAPQINSHSPKFTCVCPDGILLAKDMRSCLPEAEPVPSTQRP
ATIKTVVSTTTGKPRHKDTQPVSSTWRSPVGTVALTTAQSLIMSSQAQGDVAGRGAEGQR
QGVGALSIVLPLALLGLLGFVAFLVWKNWRLKNVNSINFDNPVYQKTTTEDEVHICRNQD
GYTYPSRQMVSLEDDLA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctggggcgccgagctgctctgcgccgccgcgctgctcctgggggctgcgggg
gctgcagcccaagatacctgcagccgaaatgagtttcagtgccaggacgggaaatgcatc
tccagacggtggatctgtgatggcagccctgagtgtccagacggctcggatgaatcccgg
gagacctgcacgtctgtcacctgcaaagcggacgacttcagttgcggaggcctcgtcaac
cgctgcatccctgactcctggcgatgtgatggccagatagactgccaaaacggctcagac
gagcaaggctgtggccccaggacctgctcggccggggagttccgctgccaggacggcagg
tgcatctcgcagcagttcgtgtgcgacggggaccgggactgcctggacggtgcggacgag
ctggcctgcccggcgcgcacctgcggcccagccgacttccgctgcaactcgtcggcctgc
atccccgagctgtgggcctgcgaccaggacccggactgcgacgacggctcggacgagtgg
ccgcagcggtgcggggcggcgccggccccgcccggcccctgtgcggcgctcgagttccac
tgcggcagcggcgagtgcgtgcacatcagctggcgctgcgacggcggggccgactgccgc
gaccggtccgacgagcacgcctgcgctgtggccacctgccgccctgacgagttccggtgc
tccgacgggtcctgcgtccacggcagccgccagtgtgacggggagtacgactgcagcgac
atgagtgacgagctcggctgtgccaacgtgacactgtgtgagggtcccaacaagttcaag
tgccacagcggggagtgcattgccatggacaaagtgtgcgactcggccagggactgccgg
gactggtctgacgagcccatcaaggagtgtgggaccaatgagtgtgctgacaacaatggg
ggctgttctcacgaatgccaggacctcaagattggccaccagtgcctgtgccccaacggc
ttccggctagtggaccagcacaggtgccaagatatagatgagtgtcaggagcttgacacg
tgcagccagcgatgcgtgaacctggagggcggctacaaatgtgagtgcgagacgggcttc
cagatggacccccacaccaaagcctgcaaggctgtgggctccatcgcctaccttttcttc
accaaccgccatgaggtgaggaagatgacgctggaccgcagcgagtacgtcagcctcatc
cccaacttgaagaacgtggttgctctggataccgaggtggccagcaacagaatctactgg
tccgacatctcccaaagaaagatctacagcacccagatcgaccgtgcccccaacgcgtcc
tacaacaccatcctcagcgtcaacctgcaggcccctgacgggctggctgtggactggatc
cacggccacatctactggaccgactccgtcctgggcaccgtgtctgtggccgacaccagg
ggctccaagaggaagacgctggtgcagaagagtggctccaagccgcgggccatcgtggtg
gacccggtgcatggcttcatgtactggacagactggggcacccctgccaagatcgagaaa
ggtggcctgaatggcatggatgtgtactcgctggtgacagaagacatccagtggcccaat
ggcatcactttggatcttgccagtggccgcctctactgggttgattccaaactccactcc
atctccagcatcgatgtcaacggaggtaatcgaaagatcatcctagaagatgagaagcgg
ctagctcaccctttctccttggccatctttgaggagaaagtattttggacagatatcatc
aatgaagccatttacagtgccaatcgcctcactggctcagatgtgaatttgatggccgaa
aacctcttgtcccctgaagatattgtcttgttccacaatatcacccagccaagaggagta
aactggtgtgagaggaccgctctccccaatggtggctgccaatatctgtgtctgcctgct
cctcagatcaactcccactccccgaagttcacctgtgtctgtccagacggcatactgctt
gccaaggacatgaggagctgcctcccagaggcggagcctgtaccaagcactcagaggcca
gccaccatcaaaactgtggtcagcactacaacagggaaaccaaggcacaaagacacccag
cctgtttccagcacttggaggagcccggtgggcacagtggcactcaccacggcgcagtcc
ctgatcatgtcctcacaagctcagggagacgtggctggcagaggcgccgaggggcagcgg
cagggggtgggagccctgtccatcgtgctcccccttgccctgctcggcctcctgggcttc
gtggccttcctggtctggaagaactggcgcttgaagaacgtgaacagcataaatttcgac
aaccccgtgtaccagaagacaacgacggaggatgaggtccacatctgccgcaaccaggac
ggctacacctacccctcgagacagatggtcagcctggaggacgacctggcgtga
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