Perognathus longimembris pacificus (Pacific pocket mouse): 125350001
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Entry
125350001 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoproteins A2/B1-like
KO
K13158
heterogeneous nuclear ribonucleoprotein A2/B1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125350001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125350001
03041 Spliceosome [BR:
plop03041
]
125350001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125350001
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125350001
Spliceosome [BR:
plop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
125350001
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125350001
Exosomal proteins of colorectal cancer cells
125350001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
125350001
NCBI-ProteinID:
XP_048200239
LinkDB
All DBs
Position
4:60435829..60437166
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AA seq
288 aa
AA seq
DB search
MAARPHSIDGRVVEPKRAVARDESGKPGAHVTVKKLFVGGIKEDTEKHHLRDYFEEYGKI
DTIEIITDRQSGKKRGFGFVTFDVHDPVVKIVLQKYHTINGHNAEVRKALSSQEMQEVQS
SRSGRGGNFGFGESRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGG
SPGYGGGRRGYGGGGPGHGNQGGGYRGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKN
GNVGGQERGGPYGGGNYGPGGSGGSGGYVGGADTELLPIFHGIDMNHG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaggcctcattcaattgatgggagagtggttgagccaaaacgtgctgtagca
agagatgagtctggaaaaccaggggctcatgtgactgtgaagaagctgtttgttggtgga
attaaagaagatactgagaaacatcaccttagagattactttgaagaatatggaaaaatt
gataccattgagataattactgataggcagtctggaaagaaaagaggctttggctttgtt
acttttgatgtccatgatcctgtggttaaaattgtgttgcaaaaataccacactatcaat
ggtcataatgcagaagtaagaaaggcattgtctagccaagagatgcaggaggtccaaagt
tctaggagtggaagaggagggaactttggttttggggaatctcgtggtggcggtggaaat
tttggaccaggaccaggaagtaactttagagggggatctgatggatatggaagtggacgt
ggatttggtgatggctataatgggtatggaggaggacctggaggtggcaattttggaggt
agccctggttatggaggaggaagaagaggatatggtggtggaggacctggacatggcaac
cagggtgggggctacagaggtggttatgacaactatggaggaggaaattatggaagtgga
aattacaatgattttggaaattacaaccagcaaccttctaactatggtccaatgaagaat
ggaaacgttggtggtcaggaacgtgggggcccatatggtggaggaaactatggtcctgga
ggcagtggtggaagtggtggttatgtgggaggagccgatactgagcttcttcctattttt
catggcattgatatgaaccatggataa
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