Perognathus longimembris pacificus (Pacific pocket mouse): 125350627
Help
Entry
125350627 CDS
T08928
Symbol
Iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125350627 (Iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plop01007
]
125350627 (Iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125350627 (Iars1)
Enzymes [BR:
plop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
125350627 (Iars1)
Amino acid related enzymes [BR:
plop01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125350627 (Iars1)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125350627 (Iars1)
Prokaryotic type
Other AARSs
125350627 (Iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
125350627
NCBI-ProteinID:
XP_048201360
LinkDB
All DBs
Position
1:108329786..108386988
Genome browser
AA seq
1261 aa
AA seq
DB search
MVQQVPENINFPAEEEKILEFWSKFDCFQECLKQSKHRPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKMGIAEYNRQC
RAIVMRYSSEWRSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLIYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVFITFPLEEDENISLVAWTTTPWTLPSNLALCVNP
DMQYVKIKDVARGKLLILMEARLLALYKLESDYEILERFPGAYLKGKKYKPLFDYFLKYK
EKGAFTVLVDHYVKEEEGTGVVHQAPYFGADDYRVCMDANIIQKDSVPICPVDASGCFTA
EVTDFTGQYVKDADRNIIRTLKEHGRLLIASTFTHSYPFCWRSDTPLIYKAVPSWFVRVE
HMADQLLKNNDLCYWVPEFVREKRFGNWLKDAHDWAISRNRYWGTPIPLWVSEDLEEVVC
IGSVAELEELSGVKVSDLHRESIDYLAIPSRCGKGSLRRISEVFDCWFESGSMPYAQVHY
PFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPLMIIQKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFFIQNVVRLHKEEEMEFLYNENTVKESPNITDRWILSFMQSLIGFFETEMTAYRLYTVV
PRLVKFVDTLTNWYVRMNRRRLKGENGLEDCVVALETLFSVLLSLCRLMAPYTPFLTELM
YQNLKMLIDPASVQDKDTLSIHYLMLPHVREELIDKKTEGAVSRMQSVIELGRVIRDRKT
IPIKYPLKEIIVIHQDPEALKDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFKSVMMAIKQLSSEALEEFQKSGSIVVEGHELHEEDIRLMYTFDQSTGGSAQ
LEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEVTVYYKAKSEGY
LNSVIESHTEFIFATVKAPLKPYPVLTSDKILIQEQIQLKGSDLEITLTQGSSQPGPACA
YVNLNICTNGNEQGGVLLLENPKGENRLDLLKLKSVVTSIFGIKNADLAVFCGNSEIQNQ
ADLLNLSGKTLCVTTGSTPSPINSPSTLLCQYINLQLLNAKPQECLMGTVGTLLLENPLG
QNGLTHQGLLLEAAKVFGLRSRKLKLFLNEAQTEEITEDIPIKTLNMKTVYVSVLPTTAE
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggtacaacaagttccagaaaacatcaattttcctgctgaagaagagaaaatcttggag
ttctggtccaaatttgattgctttcaggagtgcttaaagcagtcaaaacataggccaaaa
tttaccttctatgatggacctccttttgcaactggactgcctcactatggacatatactt
gctgggacaattaaagatatagttacaagatatgctcaccaaagtgggtttcatgttgat
cgaagatttggatgggattgtcatggtttacctgtggaatatgaaattgataagacactg
ggaatcagaggaccagaggatgtggccaaaatggggattgcagaatataaccgtcagtgc
cgggcaattgtgatgagatactcttctgagtggaggtctactgttaccagacttggccgg
tggattgattttgacaatgactacaaaactttgtatccacaatttatggagtctgtctgg
tgggtcttcaaacaactgtatgataaaggcctcatttatagaggtgtgaaagtcatgccc
ttctccaccgcatgtaatactcctctttctaacttcgaatcacaccagaattacaaggat
gttcaagatccttcagtatttataactttccctttggaggaagatgaaaatatatcatta
gttgcttggacaaccactccctggactctgcctagtaaccttgctctatgtgttaatcct
gatatgcagtatgtaaagataaaagatgttgccagaggaaaattactcattttaatggag
gccagattattagccctctataagttggaaagtgactatgagatccttgaaaggttccct
ggtgcctatctgaaaggcaagaagtacaagcccttgtttgactactttctgaagtataaa
gaaaaaggtgctttcactgttcttgtcgaccactatgtgaaggaggaagaaggcacaggg
gttgtgcatcaagccccttactttggtgctgatgactatcgggtctgtatggatgccaac
attattcagaaagactcggttcccatttgtcctgtggatgcttcaggctgcttcacagca
gaagtgacagatttcacaggacagtatgtgaaggatgctgacagaaatatcatcaggaca
ctgaaggaacatggccgacttcttattgccagcactttcactcacagctatcctttctgc
tggaggtcagatactccactcatttacaaagcagtgcccagctggtttgtacgcgtggaa
cacatggcggaccagcttctgaagaacaatgacctgtgttactgggtcccagagtttgtg
cgagaaaagcggtttggaaattggctaaaagatgcacatgactgggcaatttctagaaac
agatactggggtacccccatcccactgtgggtcagtgaagacttggaggaggtagtttgc
attgggtccgtggcagaacttgaagaactatcaggagtaaaggtttccgatctccaccga
gagagcattgactacctggctattccatcacggtgtgggaaaggctcgttgcggcgaatc
tctgaagtttttgactgctggtttgagagtggcagcatgccttatgctcaagttcattat
ccatttgaaaacaagagggaatttgaagatgcttttcctgcagatttcattgctgagggc
atcgaccaaaccagaggatggttttacactctgttggtactggccacagccctctttgga
caaccacctttcaagaatgtgattgtaaatggacttgtcctggcaagtgatggacaaaaa
atgagcaaaaggaaaaagaattatccagatccacttatgatcatccagaagtacggtgct
gatgccctcaggttatatctgattaattcccctgtggtgagagcagaaaatctccgcttt
aaggaggaaggtgtgcgggacgtcctgaaggatgtgctgctcccatggtacaatgcatat
cgtttcttcatccagaatgttgtgagacttcacaaggaggaagaaatggaattcctttac
aatgagaacacagttaaagaaagccctaacatcacagaccggtggatcctatccttcatg
cagtcactcatagggttctttgagactgaaatgacagcttacaggctttatactgtggtg
cctcgcctagtcaagtttgtggatactctcactaattggtatgtcagaatgaaccgcaga
agattaaagggtgaaaatggactggaagattgtgtcgtggccctggagaccttgttcagc
gtcctgctttccttgtgcagactgatggctccctacacaccatttctcactgaattgatg
taccagaatctaaagatgctgatagaccctgcttctgtccaggacaaggacacactgagc
attcactacctcatgctgccacatgttcgagaggaactgattgacaagaaaactgagggt
gctgtgtctagaatgcagtctgtcattgaacttggacgggtgatccgggaccgcaaaact
attccaataaagtatcctttgaaagaaattattgttatccatcaagatccagaagctctt
aaagatatcaagtctttggagaagtacatcattgaggaattgaatgttcgaaaagttaca
ctgtctactgataaaaacaaatatggcattcgactaagagcagaaccagatcacatggtc
cttgggaagcgtctgaagggagcttttaaatcggtgatgatggccatcaagcagctgagt
agtgaagctctggaggagttccagaagagtggaagcattgttgtagaaggtcatgaatta
catgaagaagacattcgcctcatgtatacctttgaccaaagcacaggtgggagtgcacaa
cttgaagcacattcagatgctcaggctttggttctgttagatgtcacccctgaccagtca
atggtggatgaaggcatggctcgggaagtcatcaatcgcatccagaaacttcggaagaag
tgtaatctggttccaactgatgaagtaacggtttattataaggcaaagtctgaaggatac
ctgaatagtgttattgaaagccacacagagttcatatttgccaccgtaaaggctcctttg
aaaccatatccagtccttacatcagataaaatccttattcaagaacaaatacagttaaag
ggatctgacctggaaattacactcacccaaggatcatcccagcctggtcctgcttgtgca
tatgtcaatcttaacatttgtacaaatggcaatgaacaaggtggagtattgcttttggaa
aatccaaagggcgaaaatagattggaccttttaaagctaaagagtgttgttactagcatt
tttggtattaaaaatgcagatctggctgtcttctgtggtaactcagaaatacaaaaccaa
gctgacctactgaatcttagtggaaagacactttgtgtgactacaggatcaactccctct
cccatcaacagtcctagtacgcttctttgtcagtatatcaacctgcagctcctcaatgca
aagccacaagagtgtttaatgggaacagtgggcactcttctgcttgaaaacccacttgga
cagaatggacttacccatcaaggtcttctgcttgaagcagctaaggtgtttggccttcga
agcaggaagctcaagctgtttctgaatgaggctcaaacagaagaaatcacagaagatatc
cccataaagactctgaatatgaagactgtgtatgtttctgtgttaccaacaactgcagag
agctaa
DBGET
integrated database retrieval system
