Perognathus longimembris pacificus (Pacific pocket mouse): 125351527
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Entry
125351527 CDS
T08928
Symbol
Traf2
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04010
MAPK signaling pathway
plop04064
NF-kappa B signaling pathway
plop04071
Sphingolipid signaling pathway
plop04137
Mitophagy - animal
plop04141
Protein processing in endoplasmic reticulum
plop04210
Apoptosis
plop04217
Necroptosis
plop04380
Osteoclast differentiation
plop04621
NOD-like receptor signaling pathway
plop04622
RIG-I-like receptor signaling pathway
plop04657
IL-17 signaling pathway
plop04668
TNF signaling pathway
plop04920
Adipocytokine signaling pathway
plop04932
Non-alcoholic fatty liver disease
plop05010
Alzheimer disease
plop05014
Amyotrophic lateral sclerosis
plop05016
Huntington disease
plop05017
Spinocerebellar ataxia
plop05022
Pathways of neurodegeneration - multiple diseases
plop05132
Salmonella infection
plop05135
Yersinia infection
plop05160
Hepatitis C
plop05163
Human cytomegalovirus infection
plop05167
Kaposi sarcoma-associated herpesvirus infection
plop05168
Herpes simplex virus 1 infection
plop05169
Epstein-Barr virus infection
plop05170
Human immunodeficiency virus 1 infection
plop05200
Pathways in cancer
plop05203
Viral carcinogenesis
plop05222
Small cell lung cancer
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125351527 (Traf2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125351527 (Traf2)
04064 NF-kappa B signaling pathway
125351527 (Traf2)
04668 TNF signaling pathway
125351527 (Traf2)
04071 Sphingolipid signaling pathway
125351527 (Traf2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125351527 (Traf2)
09143 Cell growth and death
04210 Apoptosis
125351527 (Traf2)
04217 Necroptosis
125351527 (Traf2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125351527 (Traf2)
04622 RIG-I-like receptor signaling pathway
125351527 (Traf2)
04657 IL-17 signaling pathway
125351527 (Traf2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
125351527 (Traf2)
09158 Development and regeneration
04380 Osteoclast differentiation
125351527 (Traf2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125351527 (Traf2)
05203 Viral carcinogenesis
125351527 (Traf2)
09162 Cancer: specific types
05222 Small cell lung cancer
125351527 (Traf2)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125351527 (Traf2)
05160 Hepatitis C
125351527 (Traf2)
05168 Herpes simplex virus 1 infection
125351527 (Traf2)
05163 Human cytomegalovirus infection
125351527 (Traf2)
05167 Kaposi sarcoma-associated herpesvirus infection
125351527 (Traf2)
05169 Epstein-Barr virus infection
125351527 (Traf2)
09171 Infectious disease: bacterial
05132 Salmonella infection
125351527 (Traf2)
05135 Yersinia infection
125351527 (Traf2)
09164 Neurodegenerative disease
05010 Alzheimer disease
125351527 (Traf2)
05014 Amyotrophic lateral sclerosis
125351527 (Traf2)
05016 Huntington disease
125351527 (Traf2)
05017 Spinocerebellar ataxia
125351527 (Traf2)
05022 Pathways of neurodegeneration - multiple diseases
125351527 (Traf2)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125351527 (Traf2)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
125351527 (Traf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125351527 (Traf2)
04121 Ubiquitin system [BR:
plop04121
]
125351527 (Traf2)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125351527 (Traf2)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125351527 (Traf2)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
125351527 (Traf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_6
CEP104_ZnF
zf-RING_4
Rogdi_lz
DUF4795
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
125351527
NCBI-ProteinID:
XP_048202311
LinkDB
All DBs
Position
1:162068692..162091255
Genome browser
AA seq
500 aa
AA seq
DB search
MAAASVTPPGSLDLLQPGFSKTLLGTKLEAKYLCSACGNVLRRPFQAQCGHRYCSFCLTS
ILSSGPQNCAACVHEGIYEEGVSILESSSAFPDNAARREVESLPAVCPNAGCTWKGTLKE
YESCHEGLCPFLLTECPACRGLVRLGERERHAESACPERRLSCPHCRASCSPADMEAHRE
ACPQFPLTCGGCSKRISRDELQDHLRACGKCLVPCRFHPVGCSTMAEAEDLQEHEAQQLR
EHLALLLSSLLEAQTLLEAPGQVGPELLPRCQALERKTATFENIVCVLNREVERVAMTAE
ACSRQHQLDQDRIEALTNKVQQLERSIGLKDLAMADLEQKVLELEASTYDGVFIWKISDF
ARKRQEAVAGRTPAIFSPAFYTGKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMRGPHDAL
LRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVGDMNIASGCPLFCPVSKMEAK
NSYVRDDAIFIKAIVDLTGL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccagcgtgaccccccctggctccctcgacctgctgcagccgggcttctcc
aagactctcctcgggaccaagctggaggccaagtacctgtgctccgcctgcgggaacgtg
ctgcggaggcccttccaggcccagtgtggccaccgctactgctccttctgcctgaccagc
atcctcagctccggaccacagaattgtgctgcctgtgtccacgagggcatctatgaagaa
ggcgtctctattttagaaagcagttcggcctttccagacaacgctgcgcgtagggaggtg
gaaagcctgcccgccgtctgccccaacgccgggtgcacctggaaggggaccctgaaggag
tatgagagctgccacgaagggctctgcccgttcctgctgacggagtgccccgcgtgcaga
ggcctggtgcgtctcggcgagagggagcgtcacgccgagagcgcgtgcccggagcggcgc
ctgagctgcccacactgccgggcctcctgcagccccgccgacatggaggcacaccgggag
gcctgccctcagttcccactgacctgtggtggctgcagcaagaggatctctcgggacgag
ctccaggaccacctgagggcgtgtggcaagtgcctggtcccctgcaggttccaccccgtc
ggctgctccacgatggccgaggcggaggatctgcaggagcacgaggcccagcagctgcgg
gagcacttggcgctgctgctcagctcgctcctggaggcccagacgctcctggaggccccc
ggccaggtcgggccggagctgctgccccggtgccaggccctggagcggaagacagccacc
ttcgagaacatcgtctgtgtcttgaaccgagaggtggagagggtggccatgaccgcggag
gcctgcagccggcagcaccagctggaccaggacaggatcgaagccctgaccaacaaggtg
cagcagctggagcggagcatcggcctcaaggacttggccatggcggacctggagcagaag
gtcctggagctggaggcatccacctatgacggggtcttcatctggaagatctcagacttt
gccaggaagcgccaagaagctgtggctggccgcacgcctgccatcttctccccagccttc
tacaccggcaagtacggctacaagatgtgcctgcgcgtgtacctgaacggggacggcacg
gggcggggcacgcacctctcgctcttcttcgtggtgatgcgaggcccccacgatgccctc
cttcgctggcccttcaaccagaaggtgacgctgatgctgctcgatcagaacaaccgggag
cacgtgatcgacgccttcaggccggatgtgacctcgtcctccttccagaggccggtcggc
gacatgaacattgccagcggctgccccctcttctgccccgtgtccaagatggaggccaag
aactcctatgtgcgggatgacgccatctttatcaaagccattgtggacttgacggggctc
tga
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