KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125351527
Entry
125351527         CDS       T08928                                 
Symbol
Traf2
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04010  MAPK signaling pathway
plop04064  NF-kappa B signaling pathway
plop04071  Sphingolipid signaling pathway
plop04137  Mitophagy - animal
plop04141  Protein processing in endoplasmic reticulum
plop04210  Apoptosis
plop04217  Necroptosis
plop04380  Osteoclast differentiation
plop04621  NOD-like receptor signaling pathway
plop04622  RIG-I-like receptor signaling pathway
plop04657  IL-17 signaling pathway
plop04668  TNF signaling pathway
plop04920  Adipocytokine signaling pathway
plop04932  Non-alcoholic fatty liver disease
plop05010  Alzheimer disease
plop05014  Amyotrophic lateral sclerosis
plop05016  Huntington disease
plop05017  Spinocerebellar ataxia
plop05022  Pathways of neurodegeneration - multiple diseases
plop05132  Salmonella infection
plop05135  Yersinia infection
plop05160  Hepatitis C
plop05163  Human cytomegalovirus infection
plop05167  Kaposi sarcoma-associated herpesvirus infection
plop05168  Herpes simplex virus 1 infection
plop05169  Epstein-Barr virus infection
plop05170  Human immunodeficiency virus 1 infection
plop05200  Pathways in cancer
plop05203  Viral carcinogenesis
plop05222  Small cell lung cancer
plop05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125351527 (Traf2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125351527 (Traf2)
   04064 NF-kappa B signaling pathway
    125351527 (Traf2)
   04668 TNF signaling pathway
    125351527 (Traf2)
   04071 Sphingolipid signaling pathway
    125351527 (Traf2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    125351527 (Traf2)
  09143 Cell growth and death
   04210 Apoptosis
    125351527 (Traf2)
   04217 Necroptosis
    125351527 (Traf2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    125351527 (Traf2)
   04622 RIG-I-like receptor signaling pathway
    125351527 (Traf2)
   04657 IL-17 signaling pathway
    125351527 (Traf2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    125351527 (Traf2)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    125351527 (Traf2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125351527 (Traf2)
   05203 Viral carcinogenesis
    125351527 (Traf2)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    125351527 (Traf2)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    125351527 (Traf2)
   05160 Hepatitis C
    125351527 (Traf2)
   05168 Herpes simplex virus 1 infection
    125351527 (Traf2)
   05163 Human cytomegalovirus infection
    125351527 (Traf2)
   05167 Kaposi sarcoma-associated herpesvirus infection
    125351527 (Traf2)
   05169 Epstein-Barr virus infection
    125351527 (Traf2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125351527 (Traf2)
   05135 Yersinia infection
    125351527 (Traf2)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125351527 (Traf2)
   05014 Amyotrophic lateral sclerosis
    125351527 (Traf2)
   05016 Huntington disease
    125351527 (Traf2)
   05017 Spinocerebellar ataxia
    125351527 (Traf2)
   05022 Pathways of neurodegeneration - multiple diseases
    125351527 (Traf2)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    125351527 (Traf2)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    125351527 (Traf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plop03019]
    125351527 (Traf2)
   04121 Ubiquitin system [BR:plop04121]
    125351527 (Traf2)
Enzymes [BR:plop01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125351527 (Traf2)
Messenger RNA biogenesis [BR:plop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     125351527 (Traf2)
Ubiquitin system [BR:plop04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    125351527 (Traf2)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-RING_6 CEP104_ZnF zf-RING_4 Rogdi_lz DUF4795 Sina_ZnF
Other DBs
NCBI-GeneID: 125351527
NCBI-ProteinID: XP_048202311
LinkDB
Position
1:162068692..162091255
AA seq 500 aa
MAAASVTPPGSLDLLQPGFSKTLLGTKLEAKYLCSACGNVLRRPFQAQCGHRYCSFCLTS
ILSSGPQNCAACVHEGIYEEGVSILESSSAFPDNAARREVESLPAVCPNAGCTWKGTLKE
YESCHEGLCPFLLTECPACRGLVRLGERERHAESACPERRLSCPHCRASCSPADMEAHRE
ACPQFPLTCGGCSKRISRDELQDHLRACGKCLVPCRFHPVGCSTMAEAEDLQEHEAQQLR
EHLALLLSSLLEAQTLLEAPGQVGPELLPRCQALERKTATFENIVCVLNREVERVAMTAE
ACSRQHQLDQDRIEALTNKVQQLERSIGLKDLAMADLEQKVLELEASTYDGVFIWKISDF
ARKRQEAVAGRTPAIFSPAFYTGKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMRGPHDAL
LRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVGDMNIASGCPLFCPVSKMEAK
NSYVRDDAIFIKAIVDLTGL
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggctgcagccagcgtgaccccccctggctccctcgacctgctgcagccgggcttctcc
aagactctcctcgggaccaagctggaggccaagtacctgtgctccgcctgcgggaacgtg
ctgcggaggcccttccaggcccagtgtggccaccgctactgctccttctgcctgaccagc
atcctcagctccggaccacagaattgtgctgcctgtgtccacgagggcatctatgaagaa
ggcgtctctattttagaaagcagttcggcctttccagacaacgctgcgcgtagggaggtg
gaaagcctgcccgccgtctgccccaacgccgggtgcacctggaaggggaccctgaaggag
tatgagagctgccacgaagggctctgcccgttcctgctgacggagtgccccgcgtgcaga
ggcctggtgcgtctcggcgagagggagcgtcacgccgagagcgcgtgcccggagcggcgc
ctgagctgcccacactgccgggcctcctgcagccccgccgacatggaggcacaccgggag
gcctgccctcagttcccactgacctgtggtggctgcagcaagaggatctctcgggacgag
ctccaggaccacctgagggcgtgtggcaagtgcctggtcccctgcaggttccaccccgtc
ggctgctccacgatggccgaggcggaggatctgcaggagcacgaggcccagcagctgcgg
gagcacttggcgctgctgctcagctcgctcctggaggcccagacgctcctggaggccccc
ggccaggtcgggccggagctgctgccccggtgccaggccctggagcggaagacagccacc
ttcgagaacatcgtctgtgtcttgaaccgagaggtggagagggtggccatgaccgcggag
gcctgcagccggcagcaccagctggaccaggacaggatcgaagccctgaccaacaaggtg
cagcagctggagcggagcatcggcctcaaggacttggccatggcggacctggagcagaag
gtcctggagctggaggcatccacctatgacggggtcttcatctggaagatctcagacttt
gccaggaagcgccaagaagctgtggctggccgcacgcctgccatcttctccccagccttc
tacaccggcaagtacggctacaagatgtgcctgcgcgtgtacctgaacggggacggcacg
gggcggggcacgcacctctcgctcttcttcgtggtgatgcgaggcccccacgatgccctc
cttcgctggcccttcaaccagaaggtgacgctgatgctgctcgatcagaacaaccgggag
cacgtgatcgacgccttcaggccggatgtgacctcgtcctccttccagaggccggtcggc
gacatgaacattgccagcggctgccccctcttctgccccgtgtccaagatggaggccaag
aactcctatgtgcgggatgacgccatctttatcaaagccattgtggacttgacggggctc
tga

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