Perognathus longimembris pacificus (Pacific pocket mouse): 125351917
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Entry
125351917 CDS
T08928
Name
(RefSeq) peroxisomal bifunctional enzyme-like
KO
K07514
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase [EC:
4.2.1.17
1.1.1.35
5.3.3.8
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00071
Fatty acid degradation
plop00280
Valine, leucine and isoleucine degradation
plop00310
Lysine degradation
plop00380
Tryptophan metabolism
plop00410
beta-Alanine metabolism
plop00640
Propanoate metabolism
plop00650
Butanoate metabolism
plop01100
Metabolic pathways
plop01212
Fatty acid metabolism
plop03320
PPAR signaling pathway
plop04146
Peroxisome
Module
plop_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
plop_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
125351917
00650 Butanoate metabolism
125351917
09103 Lipid metabolism
00071 Fatty acid degradation
125351917
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125351917
00310 Lysine degradation
125351917
00380 Tryptophan metabolism
125351917
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
125351917
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125351917
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125351917
Enzymes [BR:
plop01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
125351917
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
125351917
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
125351917
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
TrkA_N
Peptidase_S49
UDPG_MGDP_dh_N
F420_oxidored
ApbA
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
125351917
NCBI-ProteinID:
XP_048202973
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All DBs
Position
5:61497683..61532600
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AA seq
723 aa
AA seq
DB search
MAEYLRLPQSLALIRLRNPPVNAVSVAVLRGIKDGLQKAISDHTIKAIVISGSNGKFCAG
ADIHSFSTPQSSGIGLGGVVDELQRNKKPVVAAIEGVALGGGLELALGCHYRIAHAETEI
GFTEVTLGILPGARGTQLLPRLIGLSAALDLITSGRRILAGEALKMGIVDKVVNSDVLEE
AIKFAQQIVDKPVEPRRILNKPVPSLSNMDTIFSEAFIKMRKQYPGVLAPETCVRAVQAS
VKYPYEVGIKEEEKLFRYLRESGQARALQYAFFAERIANKWSTPSGASWKTASGRPISSV
GVLGLGTMGRGIAISFAMARIPVIAIESDQKQLEAAKKAVASILEKEASKRQQSGKAWSA
PKLIFASSVKELADVDLVVEAVFEDMNLKKQVFAELSAVCKPGAFLCTNTSALDVDEIAA
ATDRPQLVIGTHFFSPAHVMRLLEVIPSHYSSPTTIATVMDLSKKIKKIGVVVGNCHGFV
GNRMLAPYYNQTYFLLEEGSKPEDIDGVLEGFGFKMGPFRVSDLAGLDVGWKVRKGQGLT
GPALPAGTPARKRGNARYCPIADMLCESGRFGQKTGKGWYLYDKPLGRIHKPDPWLSKFL
SQYRETYHIESRVIRQDEILERCLYALINEAFRILGEGMASSPEHIDVIYLHGYGWPRHQ
GGPMFYASTVGLPTVLEKLQNYHRQNPDIPQLEPSNYLKKLAAQGNPPLKEWQSLAGRPY
SKL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtacttgaggctgccccaatccctggcgctcatccgcctgcgaaacccgcct
gtcaacgcggtcagtgtggctgtactccgtggaataaaagatggactacagaaagctata
tcagaccatacaataaaagccattgtgatttctggatcaaacggcaaattctgtgcaggt
gcggatatccatagcttcagcactcctcaatcctctggcatcggattgggaggtgtagta
gatgaactgcagagaaataagaagcctgtggtggcagctatcgaaggcgtggctttagga
gggggactggagctggccttgggctgtcactataggattgcacatgcagagactgagatt
ggcttcacagaagtcactctgggaatccttcctggtgcaagaggaacccagcttcttccc
agactcattggactttctgctgcacttgacctgataacctcaggaagacgtattttggca
ggtgaagcactcaagatggggattgtggataaagttgtgaactcagatgtgcttgaagaa
gcaatcaaatttgcccagcaaattgttgataaacctgtggaaccacgcagaatcttgaac
aagccagttccgagcttgtccaacatggacaccattttcagtgaggcctttatcaagatg
cggaagcagtaccctggcgttcttgctccagagacctgtgtccgtgcagtgcaggcctct
gtgaagtatccctacgaagtgggcattaaggaggaggagaagctctttcggtacctaagg
gaatcagggcaggccagagccctgcagtatgctttctttgcagaaaggattgcaaataag
tggtcaactccctctggggcatcctggaaaacagcttcagggagacccatctcttcagtt
ggtgttcttggtttgggaacaatgggccgaggcattgccatttcctttgcaatggctagg
atccctgtgattgccatagaatcagaccaaaagcaactagaagctgcaaagaaggcagta
gcttccatcttggaaaaggaagcatccaaaaggcagcagagtggcaaagcatggtcagca
ccaaaactcatctttgcttcatctgtgaaggagcttgctgatgtcgatttagtcgtggag
gcagtatttgaggacatgaacctgaagaagcaggtctttgctgaactgtcagctgtgtgc
aagccaggagcatttttatgcaccaacacatcagcccttgatgtggatgagattgctgct
gccacggatcgtccacagctggtgattggcacccacttcttctcaccagcacatgtcatg
aggttgctggaggttattcccagccattactcttcccccaccaccattgccactgttatg
gatctatcaaagaaaattaaaaagattggggtagttgtaggcaactgtcatggctttgtt
ggcaaccgaatgttggctccatactacaatcaaacctatttcttgttagaagaaggaagt
aagccagaggacatagatggggtgctggaagggtttggttttaaaatggggccctttaga
gtatctgaccttgctggcttggatgtgggctggaaagttcgcaaagggcaaggccttact
gggcctgcattgcctgcagggactcctgcacgcaagaggggcaatgcaagatactgccca
attgctgatatgctgtgtgaatcaggaagatttggccagaagacaggcaagggctggtac
ctctatgacaagccactaggtaggattcacaaacctgatccctggctttccaagtttctg
tctcagtacagagaaacctatcacattgagtcccgtgtgattaggcaggatgagatcctt
gagcgctgcttgtatgcactcatcaatgaagctttccgtatcttgggagaaggcatggct
tccagcccagagcacattgatgttatctacttgcacgggtatgggtggccaaggcaccag
ggtgggcccatgttctatgcttccacggtgggcttgcccacagttctagagaagttgcag
aactatcacaggcagaaccctgatattccccagctggagcctagtaactacctaaaaaag
ctggctgcccagggaaaccctcctctgaaagaatggcagagtttagcagggcggccctac
agtaaactgtga
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