Perognathus longimembris pacificus (Pacific pocket mouse): 125352183
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Entry
125352183 CDS
T08928
Symbol
Spdef
Name
(RefSeq) SAM pointed domain-containing Ets transcription factor
KO
K09442
SAM pointed domain-containing ETS transcription factor
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125352183 (Spdef)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
125352183 (Spdef)
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Gene cluster
GFIT
Motif
Pfam:
Ets
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
125352183
NCBI-ProteinID:
XP_048203270
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Position
6:12242301..12255208
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AA seq
336 aa
AA seq
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MGSASPGLSDMPPSCLLLPPETLLRTGLEKVAAGVVGPEKRGWSPSPPATPEQSLSAFYL
SYFDMLCPEDGNWVAKGPLLSAAREEPAEEPEQCPVIDSQASGGGLDVVPGGLALEEHSL
EQVQSMVVGEVLKDIETACKLLNITADPGDWSPSNVQKWLLWTEHQYRLPPAGKAFQELG
GKELCDLSEEQFRQRSPLGGEVLHAHLDIWKSAAWMKERTSPGAMHYCASTSEESWTDSE
VDSSCSGQPIHLWQFLKELLLKPHSYGRFIRWLNQEKGIFKIEDSAQVARLWGIRKNRPA
MNYDKLSRSIRQYYKKGIIRKPDISQRLVYQFVHPI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgccagcccgggcctgagcgacatgccccccagctgcctgctgctgcccccc
gagaccctgctacggacaggtctggagaaggtggcagcgggggtggtgggccctgagaag
cggggctggagccccagcccacctgccacgcctgagcagagcctgtctgccttttacctc
tcctacttcgatatgctgtgcccggaggatggcaactgggtggccaagggccccttgctg
agcgctgccagggaggagccggcggaggagcccgagcagtgcccggtcattgacagccag
gcctcggggggcggcctggacgtggtgcctggcgggctggccctggaggagcactcgctg
gagcaggtgcagtccatggtggtgggtgaggtgctcaaggacatcgagacggcctgcaag
ctcctcaacatcaccgccgatcccggggactggagccccagcaatgttcagaagtggctc
ctgtggacagagcaccagtaccggctgccccctgcgggcaaggccttccaggagctgggt
ggcaaggagctgtgtgacttgtctgaggagcagttccgccagcgctcgcccctgggtggg
gaggtgctgcatgcccacctggacatctggaaatcagcggcctggatgaaggagagaacc
tcgcctggggccatgcattactgcgcctcgaccagcgaagagagctggacagacagcgag
gtggactcctcgtgttccgggcagcccatccacctgtggcagtttctcaaggagctgctg
ctcaagccgcacagctacggccgcttcatccgctggctcaaccaggagaagggcatcttc
aaaattgaagactctgctcaggtggcccggctgtggggcatccgaaagaaccggcctgcc
atgaactacgacaagctgagccgctccatccgccagtattacaagaaaggcatcatccgc
aagccagacatctcccagcgccttgtctaccaatttgtgcaccccatctga
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