KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125352379
Entry
125352379         CDS       T08928                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR beta 4 chain-like
  KO
K06752  MHC class II antigen
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04145  Phagosome
plop04514  Cell adhesion molecules
plop04612  Antigen processing and presentation
plop04640  Hematopoietic cell lineage
plop04658  Th1 and Th2 cell differentiation
plop04659  Th17 cell differentiation
plop04672  Intestinal immune network for IgA production
plop04940  Type I diabetes mellitus
plop05140  Leishmaniasis
plop05145  Toxoplasmosis
plop05150  Staphylococcus aureus infection
plop05152  Tuberculosis
plop05164  Influenza A
plop05166  Human T-cell leukemia virus 1 infection
plop05168  Herpes simplex virus 1 infection
plop05169  Epstein-Barr virus infection
plop05310  Asthma
plop05320  Autoimmune thyroid disease
plop05321  Inflammatory bowel disease
plop05322  Systemic lupus erythematosus
plop05323  Rheumatoid arthritis
plop05330  Allograft rejection
plop05332  Graft-versus-host disease
plop05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    125352379
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125352379
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    125352379
   04612 Antigen processing and presentation
    125352379
   04658 Th1 and Th2 cell differentiation
    125352379
   04659 Th17 cell differentiation
    125352379
   04672 Intestinal immune network for IgA production
    125352379
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    125352379
   05164 Influenza A
    125352379
   05168 Herpes simplex virus 1 infection
    125352379
   05169 Epstein-Barr virus infection
    125352379
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    125352379
   05152 Tuberculosis
    125352379
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    125352379
   05140 Leishmaniasis
    125352379
  09163 Immune disease
   05310 Asthma
    125352379
   05322 Systemic lupus erythematosus
    125352379
   05323 Rheumatoid arthritis
    125352379
   05320 Autoimmune thyroid disease
    125352379
   05321 Inflammatory bowel disease
    125352379
   05330 Allograft rejection
    125352379
   05332 Graft-versus-host disease
    125352379
  09166 Cardiovascular disease
   05416 Viral myocarditis
    125352379
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    125352379
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plop04147]
    125352379
Exosome [BR:plop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125352379
  Exosomal proteins of epithelial cells
   125352379
  Exosomal proteins of breast milk
   125352379
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 C2-set_3 MHC_I
Other DBs
NCBI-GeneID: 125352379
NCBI-ProteinID: XP_048203425
LinkDB
Position
6:13365409..13376392
AA seq 260 aa
MVCPGLLGGFPMAVLMVMFMVLSSPLSLTRDLQPRFLEQFKDECHFLNGTQRVRLLQRYI
YNQEEFVRFDSDLGKFIAVTELGRRDAEYWNSQEGLLEHRRAEVDTFCRHNYEVSGYLLQ
RGVMPMVTVYPMKTEPLQHHNLLVCAVNGFYPGHIEVRWFHNGQEEEAGVMSTGLVQNGD
WTFQMQVMLEMTPQQGDVYICHVEHPSLDSPVTVEWKPHSGSAQGKMMSGVGGFVLGLLF
LGAGLFIYFRKSKGEEPSGG
NT seq 783 nt   +upstreamnt  +downstreamnt
atggtgtgtccagggctccttggaggcttccccatggcagttctgatggtgatgttcatg
gtgctaagctctcctctgtctttgaccagggaccttcaaccgcgtttcctggagcaattc
aaagacgagtgtcatttcctcaacgggacgcagcgcgtgcggcttttgcagagatacatc
tacaaccaggaggagttcgtgcgcttcgacagcgacctcgggaagttcatcgcggtgacc
gagctgggccggcgggacgccgagtactggaacagccaggagggcctcctggagcacagg
cgggcggaggtggacacgttctgcagacacaactatgaggtttcggggtacctgctgcag
cgcggagttatgcctatggtgactgtgtaccccatgaagactgaacccctgcagcaccac
aacctcctggtgtgtgctgtgaatggattctacccaggccacattgaagtcagatggttc
cacaatggccaggaggaggaggctggggtgatgtccacaggcctggtccagaatggggac
tggaccttccagatgcaggtgatgctggaaatgaccccccaacagggagacgtttacata
tgccacgtggagcaccccagcctggatagtcctgtcaccgtggaatggaagccccattct
ggatctgcacagggcaagatgatgagcggagttgggggctttgtgctggggctgctcttc
ctgggtgcagggctgttcatctacttcaggaagtcaaaaggtgaggaaccttctggtggc
tga

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