Perognathus longimembris pacificus (Pacific pocket mouse): 125352673
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Entry
125352673 CDS
T08928
Symbol
Ifnb1
Name
(RefSeq) interferon beta
KO
K05415
interferon beta
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04060
Cytokine-cytokine receptor interaction
plop04151
PI3K-Akt signaling pathway
plop04217
Necroptosis
plop04380
Osteoclast differentiation
plop04620
Toll-like receptor signaling pathway
plop04621
NOD-like receptor signaling pathway
plop04622
RIG-I-like receptor signaling pathway
plop04623
Cytosolic DNA-sensing pathway
plop04630
JAK-STAT signaling pathway
plop04650
Natural killer cell mediated cytotoxicity
plop04668
TNF signaling pathway
plop04936
Alcoholic liver disease
plop05135
Yersinia infection
plop05142
Chagas disease
plop05152
Tuberculosis
plop05160
Hepatitis C
plop05161
Hepatitis B
plop05162
Measles
plop05163
Human cytomegalovirus infection
plop05164
Influenza A
plop05165
Human papillomavirus infection
plop05167
Kaposi sarcoma-associated herpesvirus infection
plop05168
Herpes simplex virus 1 infection
plop05169
Epstein-Barr virus infection
plop05170
Human immunodeficiency virus 1 infection
plop05171
Coronavirus disease - COVID-19
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
125352673 (Ifnb1)
04668 TNF signaling pathway
125352673 (Ifnb1)
04151 PI3K-Akt signaling pathway
125352673 (Ifnb1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125352673 (Ifnb1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125352673 (Ifnb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125352673 (Ifnb1)
04621 NOD-like receptor signaling pathway
125352673 (Ifnb1)
04622 RIG-I-like receptor signaling pathway
125352673 (Ifnb1)
04623 Cytosolic DNA-sensing pathway
125352673 (Ifnb1)
04650 Natural killer cell mediated cytotoxicity
125352673 (Ifnb1)
09158 Development and regeneration
04380 Osteoclast differentiation
125352673 (Ifnb1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125352673 (Ifnb1)
05161 Hepatitis B
125352673 (Ifnb1)
05160 Hepatitis C
125352673 (Ifnb1)
05171 Coronavirus disease - COVID-19
125352673 (Ifnb1)
05164 Influenza A
125352673 (Ifnb1)
05162 Measles
125352673 (Ifnb1)
05168 Herpes simplex virus 1 infection
125352673 (Ifnb1)
05163 Human cytomegalovirus infection
125352673 (Ifnb1)
05167 Kaposi sarcoma-associated herpesvirus infection
125352673 (Ifnb1)
05169 Epstein-Barr virus infection
125352673 (Ifnb1)
05165 Human papillomavirus infection
125352673 (Ifnb1)
09171 Infectious disease: bacterial
05135 Yersinia infection
125352673 (Ifnb1)
05152 Tuberculosis
125352673 (Ifnb1)
09174 Infectious disease: parasitic
05142 Chagas disease
125352673 (Ifnb1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125352673 (Ifnb1)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
125352673 (Ifnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
plop04052
]
125352673 (Ifnb1)
Cytokines and neuropeptides [BR:
plop04052
]
Cytokines
Interferons
125352673 (Ifnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF3160
DUF4441
DUF1664
LMP
KAR9
Mur_ligase_M
Motif
Other DBs
NCBI-GeneID:
125352673
NCBI-ProteinID:
XP_048203883
LinkDB
All DBs
Position
1:complement(120822737..120823294)
Genome browser
AA seq
185 aa
AA seq
DB search
MINGCIFQVILLLCFSTMVLSGSYSLLRLQKSSLACQKLLAQLNGRPEHCLNDRIDFKLP
EKIKHLQQFQKEDAAFAVYEMLKNILEVFRRDTSNTGWDAAIIKNLFTELHQQMDHLETI
LERKMEEEKLTWRNIRTILQVKSYYWRILRYLKNKEYSSCAWTIVRVETLRNFSLMNSVA
ESLEN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgggtgtatcttccaggtcattctcctgctgtgcttctccaccatggttctt
tctggcagctatagcttgcttcgactgcagaaaagcagtttggcatgccagaagctcctg
gcacaattgaatggaaggcctgaacattgcctcaatgacagaatcgacttcaagttacct
gaaaagattaaacacctgcaacaattccagaaggaagacgctgcctttgctgtctatgag
atgctgaagaacatcttggaagttttcagaagggatacctctaacactggatgggatgca
gccatcatcaaaaaccttttcaccgaacttcatcagcagatggaccatctggagacaatc
ttggaaagaaaaatggaagaggaaaaattaacctggagaaatatcaggaccattctgcag
gtgaaaagctattattggaggatcttgagatacttgaagaacaaggagtacagcagctgt
gcctggacaatagtccgagtggaaaccctcaggaacttttccctcatgaacagtgttgca
gagagcttggagaactga
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