Perognathus longimembris pacificus (Pacific pocket mouse): 125353085
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Entry
125353085 CDS
T08928
Name
(RefSeq) desmoplakin isoform X1
KO
K10381
desmoplakin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04382
Cornified envelope formation
plop04820
Cytoskeleton in muscle cells
plop05412
Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125353085
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125353085
09160 Human Diseases
09166 Cardiovascular disease
05412 Arrhythmogenic right ventricular cardiomyopathy
125353085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125353085
04147 Exosome [BR:
plop04147
]
125353085
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
125353085
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125353085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plectin
Spectrin_2
Spectrin_3
SH3_10
CCDC39
ERM_helical
Flavi_NS1
Motif
Other DBs
NCBI-GeneID:
125353085
NCBI-ProteinID:
XP_048204502
LinkDB
All DBs
Position
6:complement(36216419..36270437)
Genome browser
AA seq
2881 aa
AA seq
DB search
MSCNGGSHPRINTLGRMIRAESGPDLRYEVTCGGGGGGGGGGAARTYYSRRSAVNDQNSD
GYCQTGTVSRHQNQNTIQELLQNCSDCLMRAELIVQPELKYGDGIQLARSRELDECFAQA
NDQMEITDSLIREMRQMGQPCDAYQKRLLQLQEQMRALYKAISVPRVRRASSKGGGGYTC
QSGSGWDEFTKRLTGECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRSIHNAIGDYRWQ
LDKIKADLREKSAIYQLEEEYENLLKSSFERMDHLRQLQSIIQATSREIMWINDCEEEEL
LYDWSDKNTNIAQKQEAFSIRMSQLEAKEKELNKLKQESDQLVLNQHPASDKIEAYMDTL
QTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTESYLKGLQDSIRKKYPCDKNMPLQHL
LEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQK
IVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAVDLSCKIEQYYEAIL
ALWNQLYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTIADLELHYQEFIRNS
QGSEMFGDDDKRKMQSQFTDAQKHYQTLVIQLPGHPQHQTVTKTEITHVGSCQDVNHNKV
IETNRENDKQETWLLMELQKIRRQMEHCEGRMSLRNLLLTDQASTHHITVKINELKSIQN
DSQAIAEVLNQLKDMLANFRGSEKYCYLQNEVFGLFQKLENINGVSDGYLNSLCSVRALL
QAILQTEDMLKVYEARLTEEETVCLDLDKVEAYRCGLKKIKNDLNLKKSLLATMKTELQK
AQQIHSQSSQQYPLYDLDLGKFSEKVIQLSDRWQKIDKQIDFRLWDLEKQIKQLRNYRDN
YQSFCKWLYDAKRRQDSLESMKFGDSSTVMRFLNEQKNLHNEISGKRDKSEEVQKIAELC
ANSIKDYELQLASYTSGLETLLNIPIKRTMVQSPSGVILQEAVDIHARYIELLTRSGDYY
RFLSEMLKSLEDLKLKNTKIEVLEEELRLARDANSENCNKNKFLDQNLQKYQAECSQFKA
KLVSLEELKRQAELDGKSAKQNLDKCYAQIKELNEKITRLTYEIEDEKRRRKTVEDRFDQ
QKNDYDQLQKARQCEKENLGWQKLESEKAIKDKEYEIERLRVLLQEEGARKREYENELAK
VRKHYNEEMSNLRNKYETEINITKTTIKEISMQKEDDSKNLRNQLDRLLRENRDLKDEIV
RLNDSILQATEQRRRAEENALQQKACGSEIMQKKQHLEIELKQFIQQRSEDNARHKQSLE
EAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELNKVRNSYDEEIISLKNQFETEINITK
TTIHQLTMQKEEDTSGYRAQIDSLTRENRNLAEEIKRLKNTLAQTTENLRRVEENVQQQK
ATGSEMTQRKQQLEIELRQVTQMRTEESMRYKQSLDDAAKTIQDKNKEIDRLKQLVEKET
NERKCLEDENAKLQKVQYDLQKANSSASETISKLKFQEQELMRLRIDYERVSQERTVKDQ
DITRFQSSLKDLQLQKQKVEEELNRLKRTAFEDSSKRKKLEDELEGLRRSLKEQAIKITN
LTQQLEQASIVKKRSEDDLRQQREVLDGHMRDKQRTQEELKMLSLEVEALRRQLVQEQEN
VKQAHLRNEHFQKAIEDKSRSLNESKIEIERLQSLTENLTKEHLMLEEELRNLRLEYDDL
RRGRSEADSDKNSTISELRTQLQISNNRTLELQGLINDLQRERENLRQEIEKFQKQALEA
SNRIQESKSQCTQVVQERESLLVKIKVLEQDKARLQRLEDELNRAKATLEAESRVKQRLE
CEKQQIQNDLNQWKTQYSRKEEVIKKIESEREKSEREKNCLKSEIERLQAEIKRIEERCR
RKLEESSRETQSQLENERCRLQKEIDKLRQRPYGSHRETQTEYEWTVDSSKLVFDGLRKK
VTVMQLYECQLIDKTTLDKLLKGKKSVEEVASEIQPFLRGTGVIAGASASPKEKYSLVEA
KRKKFITPESTVMLLEAQAATGGIIDPHRNEKLTVDNAIARDLIDFDDRQQIYTAEKAIT
GFDDPFSGKTVSVSEAIKKNLIDRETGMRLLEAQLASGGIVDPVNSVFLPKDVALARGLI
DRDLYRSLNDPRDSQKNFVDPVTKKKVSYMQLRERCRIEPHTGLLLLSVQKRSMSFQGIR
QPVTVTELVDSGILRPSTVNELESGQISYDEVGERIKDFLQGSSCIAGIYNETTKQKLGI
YEAMKIGLVRPGTALELLEAQAATGFIVDPVSNLRLPVEEAYKRGLVGIEFKEKLLSAER
AVTGYNDPETGNIISLFQAMNKELIEKGHGIRLLEAQIATGGIIDPKESHRLPVDMAYKR
GYFNEELSEILSDPSDDTKGFFDPNTEENLTYLQLKERCIKDEETGLCLLPLKEKKKQVQ
TSQKNTLRKRRVVIVDPETNKEMSVQEAYKKGLIDYETFRELCEQECEWEEITITGSDGS
TRIVLVDRKTGSQYDIQDAIEKGLVDRKFFEQYRSGSLSLTQFADMISLKNGVGSSSGMS
SSVNDDVFSSSRHESVSKISTISSVRNLTIRSSSLSDPLEESSPIAAIFDTENLEKISIT
EGIERGIVDSITGQRLLEAQACTGGIIHPTTGQRLSLQDAVSQGLIDQDMATRLKPAQKA
FIGFEGVKGKKKMSAVEAVKEKWLPYEAGQRFLEFQFLTGGLVDPEVHGRISTEEAIRKG
FIDGRAAQRLQDISSYAKILTCPKTKLKISYKDAMNRSMMEDVTGLRLLEAASVSSKGLP
SPYNMSSAPGSRSGSRSGSRSASRSGSRSGSQSGSRRGSFDATGNSSYSYTYSFSTSSTG
H
NT seq
8646 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcaacggggggtcccacccgcggatcaacacgctgggccgcatgatccgcgcc
gagtccggcccggacctgcgctacgaggtgacctgcggcggcggtggcggcggcggcggc
ggaggcgccgccaggacctactactcgcggcgcagcgccgtcaacgaccagaactcggac
ggctactgccaaactggcaccgtgtccaggcaccagaaccagaacactatccaggagctc
ctgcagaactgctcagactgcctgatgcgagcagagctcattgtgcagcctgaactaaaa
tatggagatggaatacagcttgctcggagtagagaactggatgaatgttttgcacaggcc
aatgaccagatggaaatcacggacagcttgatccgggagatgcggcagatgggccagccc
tgtgatgcttatcagaaaaggctgctccagctccaggagcaaatgcgagctctgtataag
gccatcagcgtccctcgggtccgaagggccagctctaagggaggtggaggctacacttgt
cagagtggctctggctgggatgagtttacaaagagactcaccggtgaatgtctgggctgg
atgagacagcaaagggcagagatggatatggtggcatggggcgtggacctggcctcagtg
gagcagcacatcaacagccacaggagcattcacaatgccattggagactaccgctggcag
ctggacaaaattaaagctgacctgcgtgagaagtctgcaatctaccaattggaggaggaa
tatgaaaacttgctgaaatcatcctttgagaggatggaccacctgcgtcagctacagagc
atcatccaggccacatctcgagagatcatgtggatcaatgattgtgaggaggaagagctg
ctgtatgattggagcgacaaaaacaccaacattgctcagaagcaggaggctttctctatt
cgtatgagtcaactggaagccaaggagaaagagctcaataagctgaaacaggaaagtgac
caacttgttctcaatcagcatccagcttcagacaaaattgaggcatacatggacactctg
caaacacagtggagctggattctgcagatcaccaagtgcattgatgttcatctcaaagaa
aatgctgcctactttcagttttttgaagaggcacagtctaccgaatcctatctgaagggc
ctgcaggactccatcaggaagaagtacccctgtgataagaacatgcccttgcagcacttg
ctggagcagatcaaggagctagagaaagaacgggagaaaatccttgagtataagcggcag
gtacagaacttggtaaacaagtccaagaagattgtgcagctgaaaccaaggaacccagac
tacaggagcaataaacccatcattctcagagctctctgtgactacaaacaggaccagaaa
attgtgcacaaaggagatgaatgcattctgaaggacaacaatgagcgcagcaagtggtat
gtgacaggaccgggaggcgtggacatgcttgttccttctgtggggctcatcattcctcct
cccaatccactggctgtggacctctcttgcaagattgagcaatactatgaagccatcttg
gctctgtggaaccagctctatatcaacatgaagagtttggtgtcctggcactactgcatg
attgacattgagaaaatcagggccatgactatcgccaagctgaaaaccatgcggcaggag
gattacatgaagaccatagctgaccttgagcttcattaccaagagtttatcagaaacagc
caaggctctgagatgtttggagatgacgacaagcgaaagatgcagtctcagttcaccgat
gctcagaagcattaccagactctggtcatccagctccctggccacccccagcaccaaaca
gtaaccaagacagaaatcacacatgttggttcgtgccaagacgtcaatcataataaagtc
attgaaaccaacagagaaaatgacaagcaagaaacatggttgcttatggagctccagaag
attcgcaggcagatggagcattgtgagggtcggatgtccctcagaaacctcctgctgaca
gaccaagcctctacacaccacatcacagtgaaaataaatgagctcaagagcatacagaat
gattcacaagcgattgctgaagttctcaaccagcttaaagatatgcttgctaacttcaga
ggttcagaaaaatactgctacctacagaatgaggtgtttgggctctttcaaaagctggaa
aatatcaatggtgtttcagatggctacttaaatagcttatgctcagtgagagcccttctc
caggctattctccaaacggaagacatgttaaaggtctatgaagccaggctcactgaggag
gaaactgtctgcctggacctagataaagtggaggcttatcgctgtggactgaagaaaata
aaaaatgacttgaacttgaagaagtcactgctggccaccatgaagacagagctacagaaa
gcccagcagatccattcacagtcttctcagcagtatcctctctatgacctagacttggga
aagttcagtgagaaagtcatacagctgtctgatcgctggcagaaaatagataaacagata
gacttcagattatgggacctggagaaacaaattaagcaactgaggaattatcgtgataat
tatcagagtttctgtaaatggctgtatgatgccaagcgtcgccaagattccttagagtcc
atgaagtttggagattccagtacagtcatgcggtttttgaatgagcagaagaacttgcac
aatgaaatatctggcaaacgagacaaatcagaagaagtgcaaaaaattgctgaactttgt
gcaaattcaattaaggattatgaactccaattggcatcgtacacttccggactggaaact
ctgctgaacatacctattaagagaaccatggttcagtccccatctggggtgattctgcaa
gaggctgtagacattcatgctcggtacatagagctacttacaaggtctggagattattat
agattcttaagtgagatgctgaagagtttggaggatctgaagctaaaaaataccaagatt
gaagttttggaagaggaactcagactggcccgagatgccaactcagaaaattgtaataag
aacaaattcctggatcagaacctgcaaaaataccaggcagagtgttcccagttcaaagca
aagcttgtgagcttggaggagctgaagagacaagctgagctagatggaaagtcagcaaaa
caaaatctagacaagtgttatgcccaaataaaagagctcaatgagaaaatcacccgactg
acttatgagattgaagatgaaaagcgaagaagaaagactgtggaggacagatttgaccag
caaaagaatgattatgaccagctgcagaaagcaaggcagtgtgaaaaagagaacctcggc
tggcagaaattagagtctgagaaagccatcaaggataaggagtatgagatagaaaggttg
agggttctgctgcaggaagaaggcgcccggaagagagaatatgaaaatgagctggcaaag
gtaagaaaacactataatgaggagatgagtaatttaaggaacaagtatgaaacagaaatt
aacattacgaagaccaccatcaaggagatatctatgcagaaagaggatgattccaaaaat
cttagaaaccagcttgacagactcttgagggagaaccgagatctgaaggatgagattgtc
aggctcaacgacagcatcctgcaggccactgagcaacgaaggcgggctgaagaaaatgct
cttcagcaaaaagcctgtggctctgagatcatgcagaaaaagcaacatctggagattgaa
ctgaagcagttcatccagcagcgttcagaggacaatgcaagacataagcagtccctggag
gaagccgccaagaccattcaagacaaaaacaaagagatcgaaagactcaaagctgagttt
caggaggaggccaaacgccgttgggaatatgaaaatgaactgaataaggtaagaaacagt
tatgatgaggagatcattagcttaaaaaaccagtttgagaccgagatcaatatcaccaag
actaccatccaccagctcaccatgcaaaaagaagaagacaccagtggctaccgagctcag
attgacagtctcaccagagaaaacaggaatttagctgaagagattaagaggctaaagaac
accttagctcagaccactgagaatctcaggagagttgaagaaaatgtccaacagcaaaag
gctactggctcggagatgactcagaggaaacaacaattggagattgagctgagacaagtg
actcagatgcggactgaagagagcatgagatacaagcaatcacttgatgatgctgccaag
acaatccaggataaaaacaaggagatagatagattaaaacaactggtagaaaaagaaacc
aatgaacggaagtgcctggaagatgaaaatgcaaaattgcaaaaggtccagtatgacctg
caaaaagctaacagcagtgcatctgagaccataagtaaattgaaatttcaagagcaagaa
ttgatgcgcctgaggatagactatgaaagggtctcccaggagaggaccgtgaaggatcag
gacatcacacgctttcagagctctctgaaggacctgcagttgcagaagcagaaagtggag
gaggagctgaatcggctgaagaggacagccttcgaagattcctctaagaggaagaagctg
gaggatgagctggaaggcttgaggaggtctttgaaagagcaagccatcaaaatcactaat
ctgacccagcagctggagcaggcatccattgttaagaaaaggagtgaggatgacctcagg
cagcagagggaggtgctggatggacacatgagggataagcaaagaactcaggaggagttg
aagatgctgtctttggaagtggaggccttgaggcggcagctggtacaggagcaagaaaat
gtgaagcaggctcacttgaggaatgagcacttccaaaaggccatagaagataagagcaga
agtcttaatgaaagcaagatagaaatcgagaggctgcagtctctcacagagaacctgaca
aaggagcacttgatgttggaggaagaactacggaatctgaggctggaatatgatgacctg
agaaggggccggagcgaagcggatagtgataaaaactctaccatctctgaattaaggacc
caattgcagatcagcaacaaccgaactttggaactgcaggggctgattaatgatttacag
agagagagggaaaatttgagacaggaaattgagaaattccaaaagcaggctttagaggca
tctaataggatccaggaatcaaagagtcaatgcactcaggtggttcaggagagagagagc
cttctggtgaaaatcaaagtcctggagcaagacaaggccaggctgcagcggttagaggat
gagctgaatcgtgcaaaggcaacgctggaggcagaaagcagggtgaaacagcgcctggag
tgtgagaagcagcagatccagaatgacctgaatcagtggaaaactcagtattctcgaaag
gaggaggtgatcaagaagatagagtcagaaagagaaaagagtgagagagagaagaactgc
ctgaagagtgagatcgaaagactccaagcagagatcaagaggattgaggagaggtgcaga
cgaaagctggaggagtccagtagggagacacagtcacagctggaaaatgagcgctgcagg
cttcagaaggagattgataagctcagacagcgcccctatgggtcccatcgggagacccag
actgaatatgaatggactgttgactcttccaagctggtgtttgatggactaaggaagaag
gtgactgtgatgcagctctatgagtgccagctgattgacaagacaacgttggacaaactg
ttgaaggggaagaaatcagtggaagaagtggcttctgaaatccagcctttcctgcgaggt
acaggggttattgctggtgcttcagcttcccccaaggaaaaatactctttggtagaggcc
aagaggaagaaattcatcaccccagaatctacagtcatgcttctggaggcccaggcagct
acaggtggtatcattgatccccatcggaatgagaaactcactgttgacaatgccatagct
cgtgatctcattgacttcgatgaccgccagcagatctatacagcagaaaaagctatcact
ggttttgatgatcccttttcaggcaagacagtatctgtttcggaagccatcaagaaaaat
ttgattgacagagaaaccggaatgcgcctgctggaagcccagcttgcttcaggtggtata
gtagaccctgtgaatagtgtcttcttgccaaaagatgtcgccttggcccgtgggctgatt
gaccgagatttatatcgttcccttaatgatccccgagatagtcagaagaacttcgtggat
ccagtcaccaaaaagaaggtcagttacatgcagctcagggaacggtgcaggattgaaccc
cacacgggtctgctgttgctgtcagtgcagaagagaagcatgtccttccagggaatcaga
caacctgtgaccgtcactgagctggtggattctggtatactgagaccatccactgtcaat
gaactggaatcaggtcagatttcttatgatgaagtgggagagagaattaaggacttcctc
cagggttcaagctgtatagcaggcatatacaatgagaccacaaaacagaagcttggcatt
tatgaggccatgaaaattggcctagttcgacctggtaccgctctggagttgctggaagcc
caggcagctactggtttcatagtggatcctgttagcaacttgaggttacctgtagaggaa
gcctataaaagaggcctggtaggcattgagtttaaagagaagctcctgtctgcagaacga
gctgtcactggttataatgatcccgaaactggaaacatcatctctttgttccaagctatg
aacaaggaacttattgaaaagggccatggcattcgcttactggaagcacagattgccact
ggtggaatcattgacccaaaggagagccatcgtttacctgttgacatggcctataagagg
gggtattttaacgaggagcttagtgagattctctcagatccaagtgatgatactaaagga
ttttttgatcccaacactgaagaaaatcttacctatctgcaactaaaagaaagatgcatt
aaggatgaggagactgggttgtgtcttctgcctctgaaggagaagaagaaacaggtacag
acatcacaaaagaataccctcaggaagcgaagagtggtcatagttgacccagaaaccaat
aaggagatgtctgttcaggaagcctacaagaaaggccttattgattatgagaccttcaga
gagctgtgtgagcaggaatgtgaatgggaagaaataaccatcacagggtcagatgggtct
accaggatagtactagtagataggaagacaggaagtcaatatgatattcaagatgctatt
gaaaagggccttgttgataggaagttctttgagcagtaccgatcgggaagccttagcctc
actcagtttgctgacatgatctccttgaaaaatggtgtaggcagtagtagtggtatgagc
agtagtgtcaatgatgatgtttttagcagctcccgacatgaatcagtaagtaaaatttcc
accatatctagtgtgcggaatctaaccatcaggagcagctctctttctgatcccctggag
gaatcgagccccattgcagccatctttgacactgaaaacctggagaaaatatccatcaca
gaaggtatagagaggggcattgtcgatagcatcactggtcagaggcttctggaagctcag
gcctgcacaggtggcatcatccatcctaccactgggcagaggctatcacttcaggatgca
gtctcccagggtctcattgaccaagatatggctaccaggctgaagcctgctcagaaagcc
ttcattggctttgaaggtgtgaagggaaagaagaaaatgtcagcagtagaggcagtgaaa
gaaaaatggctcccctatgaggcaggccaacgcttcctggaattccagttcctcactgga
ggcctggtagacccagaggtgcatgggaggataagcacagaagaagccatcagaaagggg
ttcatcgatggccgagcagctcagagattgcaagacatcagcagctacgccaaaatcctg
acctgccccaaaaccaaattaaaaatatcctacaaagatgctatgaatcgctccatgatg
gaagatgtcactggtttgcgccttctagaagcagcgtcggtgtcctccaagggcttacct
agcccatataatatgtcttcagccccaggctcccgctcagggtcccgctcagggtcccgc
tccgcgtctcgttcaggctctcgctctggttcccaaagtgggtcccgaagaggaagcttt
gatgccacagggaattcttcctactcctatacctactcctttagcaccagctctactggg
cactag
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integrated database retrieval system
