Perognathus longimembris pacificus (Pacific pocket mouse): 125354751
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Entry
125354751 CDS
T08928
Symbol
Extl1
Name
(RefSeq) exostosin-like 1
KO
K02368
alpha-1,4-N-acetylglucosaminyltransferase EXTL1 [EC:
2.4.1.224
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
plop01100
Metabolic pathways
Module
plop_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
125354751 (Extl1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125354751 (Extl1)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
125354751 (Extl1)
Glycosyltransferases [BR:
plop01003
]
Glycan extension
O-Glycan
125354751 (Extl1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
125354751
NCBI-ProteinID:
XP_048206519
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All DBs
Position
7:15827370..15839100
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AA seq
712 aa
AA seq
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MQWRRKVLWLALSASWLLLVLLGGAPLLRLAVPPKPHPGSPQGWPRWLDAALLQSFSQPE
ELPKDASQPPPVPHSGSCNWGTCFDTSKCRRDGLKVFTYPAAGPTSELHGRILASLEGSR
FHTHSPTEACLLLVLLFPGRDAWAPPSSPQPPHWNGGRNHLVLSLHPAPCPWDSWLARAM
VAEASPMVDTFRPGFDVALPLLPEAHPFRGGNPGQLRQYSPHPGEALLALAEERGRWRMA
RINASDCPWDGQCEQDPGPHQNDPQETLPNATFCLIPGRRPEASRFLQALQAGCIPVLLS
PRWTLPFSEVIDWTKAAIIVDERLPRQVLAALQEIPAERVLAFRQQTQFLWDAYFSSVEK
VIYTTLEIIQDRIFAASAHPSLLWNSPPGALLAPPTFSMSPWDFPFYHLQLGSQPEDRFS
ALIWVGALGQAPLKLIQAVAGSQHCAQIVVLWSSERPLPPQWPESAVPLTVIEGCRKASD
RFFPHSAISTNAILSLDSCISLSTSEVDFAFTVWRSFPERIVGFLTWNHLWDETQGVWGY
TAKMTNDFSMVLTTAAFYHRYYHTLFTHSMPKALRTLADEAPSCVDVLMNFLAAAVTKLP
PIKVPYVRRRQEDTPLAPAGPGTGREPQLPAPDCINQAAAEFGHMPLVSSRLRLDPVLFK
DPVSGQRKKYRSLEKPWGDSPGPGHLKRALPARQPILTARGPSVSSRPANRD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggagaaggaaggttctctggctggcactgtcagcctcctggctcctgcttgtc
ctcctgggaggcgccccccttcttcgcctggcagtgccccctaagcctcatccagggtcc
ccccaaggctggccccgctggttggatgcagcactcctgcagagtttctcccagcctgaa
gagctccccaaagacgcctcccagcctcccccggtcccccacagcggcagttgcaactgg
gggacctgctttgacacctccaagtgcaggcgtgatggcctcaaggtcttcacgtaccca
gcagctggccccacctctgagctgcatggcaggatcctggcctccctggaaggctcccgc
ttccacacacacagcccgacagaggcctgtctcctcctcgtcctcctcttccctggcagg
gatgcctgggccccaccgagcagcccacaacctccacactggaacgggggcaggaaccat
ctggttctcagtctgcatccagccccctgcccctgggactcatggctggcacgggcgatg
gtggcagaggccagccccatggtggataccttccggccgggcttcgacgtggcactcccg
cttctccctgaagcccacccatttcgaggtgggaatcctggccagctgcggcagtacagc
cctcacccgggggaagccctgctagccctggcagaagagagaggcagatggcgcatggct
agaatcaacgcctctgactgcccctgggatgggcagtgtgagcaagaccctggaccgcat
cagaatgatccccaagaaacgctgcccaatgccactttctgcctcatccctggccgccgt
ccagaagcctcgcgcttcctccaagctctgcaggctggctgtatccccgtgctcttgagc
cctcgctggacgctgcccttctccgaggtcatcgactggaccaaggcagccataatagtt
gatgaaaggctcccacgtcaggtcctggccgccctacaggagattcccgctgagcgggtt
ctggccttccggcagcagacacagttcctgtgggatgcctacttctcctcagtggagaag
gtcatttatacgactctggagattattcaagaccggatctttgctgcatctgctcacccc
tcactgctgtggaacagccccccaggggcactcttggccccacccactttttccatgagt
ccctgggacttccctttctaccacctgcaactgggctcccagcctgaggacagattcagc
gccctgatctgggtgggggctcttggccaggcccccctgaagctcatccaggcagtggca
ggctcccagcactgtgcccagattgtggttctctggagcagtgaaaggccactcccaccc
cagtggccagagtcagcagtgcccttgaccgtcattgaggggtgcaggaaggccagtgac
cgcttctttccacacagtgccatcagcaccaatgccatcctcagccttgactcttgcatc
agtctctccacaagtgaggtggactttgccttcacagtgtggcggagctttccagagcgg
atagtaggcttcctgacatggaaccacttgtgggatgagacccagggtgtctggggctac
actgctaagatgaccaatgacttctccatggttctcaccacggctgccttctaccataga
tattaccacactctcttcacccactccatgcccaaggctctgagaaccctggcagatgag
gcacccagctgtgtggacgtgctgatgaacttcctagccgcggccgtcaccaagctgccc
cctatcaaggtgccctatgtccggaggcgccaggaggacacccccctggctccggcgggt
cccgggactgggcgggagccgcagctcccagctccggactgcatcaaccaggcggcggca
gagttcggccacatgcccctggtgtcctctcgcctgcgcctggaccccgtgctgttcaag
gaccccgtgtccgggcagcgcaagaagtaccgcagcctggagaagccctggggagactcc
cccggccccggccacctcaaaagagccctgcccgcccggcagccaatcctgacagcccgc
gggccaagcgtcagctcccgaccagccaatcgagactga
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