Perognathus longimembris pacificus (Pacific pocket mouse): 125355485
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Entry
125355485 CDS
T08928
Symbol
Hmgcs2
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, mitochondrial
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00280
Valine, leucine and isoleucine degradation
plop00650
Butanoate metabolism
plop00900
Terpenoid backbone biosynthesis
plop01100
Metabolic pathways
plop03320
PPAR signaling pathway
Module
plop_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
125355485 (Hmgcs2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125355485 (Hmgcs2)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125355485 (Hmgcs2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125355485 (Hmgcs2)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
125355485 (Hmgcs2)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
125355485
NCBI-ProteinID:
XP_048207842
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All DBs
Position
7:complement(72295200..72307853)
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AA seq
508 aa
AA seq
DB search
MQRFLAPARQVLQLKKAVQDAPLFAARLLPSAHQPLSTVAAAPLAKTDSWPKDVGILAME
VYFPAQYVDQTDLEKFNKVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTQLP
WDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWM
ESSYWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPQAPLALERGLRGTHMENAYD
FYKPNLNSEYPLVDGKLSIQCYLRALDRCYASYRKKIQTQWKQAGVERPFTLDDIQYMIF
HTPFCKMVQKSLGRLMFSDFLSSSKDTQASLYKGLEAFRELKLEETYTNKDVDKALQKAS
LDMFNKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASL
FSFRVSQDASPGSPLDKLVSSVADLPKRLDSRKRMSPEEFTEIMNQREQFYHKVNFSPPG
DTNNLFPGTWYLERVDEMHRRKYARRPM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcttcctggctcccgcaaggcaggtcctgcagctgaagaaagctgtgcaggat
gcacccctctttgcagcccgcctgctcccctcagcccaccaaccgctttccacagtcgct
gctgcccctttagccaaaacagattcttggccgaaagacgtgggcatccttgccatggag
gtctacttcccggcgcagtatgtggaccagaccgacctggagaagttcaacaaggtggag
gcgggcaaatacacggtgggcctgggccagacgcgcatgggcttctgctcggtgcaggaa
gacatcaactcgctgtgcctgacggtggtgcagcggctgatggagcgcacgcagctgccc
tgggacgcggtgggccgcctggaggtgggcacggagactatcatcgacaagtccaaggcc
gtcaagacggtgctcatggagctcttccaggactcgggcaacaccgacatcgagggcatc
gacaccaccaacgcctgctatggcggcactgcctccctcttcaatgccgccaactggatg
gagtccagctactgggatgggcgctacgcgttggtggtctgtggagacatcgctgtgtac
cccagcggcaacgccaggcccacgggcggggcaggagcagtggccatgctgatcggaccc
caggcccctcttgctctggagagagggctgagaggaacccacatggagaacgcctatgac
ttctacaagcccaatctgaactcggagtacccgctggtggacgggaagctgtccatccag
tgctacctgcgggccctggacagatgctatgcgtcctaccgcaagaaaatccagactcag
tggaagcaagctggtgtcgagcggcctttcacactggatgatatacagtacatgatcttt
cacacccctttctgcaagatggtgcagaagtcgctgggacgcctgatgttcagcgacttc
ctgtcctccagcaaggacacacaggccagcctgtacaaggggctggaggctttcagggag
ctaaagctggaagagacctacacgaacaaagatgtggataaagcgcttcagaaggcgtcc
ctggacatgttcaacaagaaaaccaaggcctccctttacctctccacccacaacggaaac
atgtacacctcctccctgtatggatgcctggcttcgctcctgtcccaccactctgctcag
gaattggctggctccaggattggtgccttctcctatggctctggtttggcagcaagtctt
ttttcgtttcgagtgtcccaggacgcttctccagggtccccgctggacaagctggtgtcc
agtgtggcagatctgcccaaacgcctggactcccggaagcgcatgtccccggaggagttc
acagagatcatgaaccagagagagcaattctaccacaaggtgaacttctcaccacctggt
gacaccaacaacctcttccccggcacatggtacctggagcgggtggatgagatgcaccgc
cggaagtacgcccggcggcccatgtga
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