Perognathus longimembris pacificus (Pacific pocket mouse): 125356608
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Entry
125356608 CDS
T08928
Symbol
Babam2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125356608 (Babam2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125356608 (Babam2)
03036 Chromosome and associated proteins [BR:
plop03036
]
125356608 (Babam2)
03400 DNA repair and recombination proteins [BR:
plop03400
]
125356608 (Babam2)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125356608 (Babam2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
125356608 (Babam2)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
125356608 (Babam2)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125356608 (Babam2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
125356608
NCBI-ProteinID:
XP_048209166
LinkDB
All DBs
Position
8:complement(60071546..60472361)
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AA seq
383 aa
AA seq
DB search
MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCISLTPGPNCDRFKLHI
PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPAALHNLASWNPANPECLLLVVKEL
VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGDNMEIYAGKKNNWTGEFSARFLLKLPVD
FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF
PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
RAKAYFKTFVPQFQEAAFANGKL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagaagttgccttgaaccggatttctccaatgctgtcaccgttcatctctagt
gttgtccgcaacggaaaagtgggactggatgccacaaattgtttgaggataacagacttg
aaatctggatgcatatcattgactcctggacccaactgtgaccgattcaaactccacata
ccgtatgctggagagacattaaaatgggatataattttcaatgcccagtatccagagctg
ccccctgattttatctttggagaggatgctgaattccttccagaccctgctgctctgcac
aaccttgcctcctggaaccctgcaaatccagagtgcctcttgcttgtggtgaaggagctt
gtgcaacagtatcaccagttccaatgcagccgccttcgtgagagctcacgcctcatgttt
gagtaccagacactactggaagagcctcagtatggagacaacatggaaatttatgctggg
aagaagaacaactggactggtgaattttcagctcgttttcttttgaagttgccagtggat
ttcagcaatattcccacataccttctcaaggatgtaaatgaagatcctggagaagatgtg
gccctcctttctgtcagttttgaggacactgaagctacccaggtgtaccccaagctgtac
ctgtcaccccgaattgagcatgccctgggaggctcctcagctcttcatattcctgctttt
ccaggaggaggatgtctcattgactatgttcctcaagtttgtcacctgctcaccaacaag
gtgcagtatgtgattcaaggatatcacaaaagaagggagtatattgctgctttcctcagt
cactttggcacaggtgtcgtggaatatgacgcagaaggctttacaaaactcactctgctg
ctcatgtggaaagacttttgttttcttgtacacattgacttgcccctgttttttcctcga
gatcagccgactctcacatttcagtccgtctatcactttaccaacagtggacagctttac
tcccaggcccaaaaaaattacccatacagccccagatgggatggaaatgaaatggccaaa
agagcaaaggcttatttcaaaacctttgtcccgcagttccaggaggccgcgtttgccaat
ggaaagctctag
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