Perognathus longimembris pacificus (Pacific pocket mouse): 125356919
Help
Entry
125356919 CDS
T08928
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125356919
09123 Folding, sorting and degradation
03018 RNA degradation
125356919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125356919
03041 Spliceosome [BR:
plop03041
]
125356919
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125356919
mRNA degradation factors
5'-3' decay
Lsm complex
125356919
Spliceosome [BR:
plop03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125356919
Complex C
U2 snRNP components
125356919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
YfkB
vATP-synt_E
LNS2
RimP_C
Motif
Other DBs
NCBI-GeneID:
125356919
NCBI-ProteinID:
XP_048209554
LinkDB
All DBs
Position
8:57477981..57478551
Genome browser
AA seq
103 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDECIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYNKSTKRNIPMLFVRGDGVVFIAPPLRVG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacgtggaccagcaacaaactaccaatactgtagaggagcccctagatctc
atcaggctcagccttgatgagtgtatttatgtgaagatgaggaatgaccgagagcttcga
ggcagattacatgcttatgaccagcacttaaatatgatactgggagatgtggaagaaacc
gtgactaccatagaaattgatgaggagacgtatgaagagatatacaacaaatcaacaaaa
cggaatatcccaatgctctttgtccggggagatggtgttgtattcattgctcctcctctg
agagttggctga
DBGET
integrated database retrieval system
