Perognathus longimembris pacificus (Pacific pocket mouse): 125357466
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Entry
125357466 CDS
T08928
Name
(RefSeq) solute carrier family 22 member 1-like
KO
K08198
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04976
Bile secretion
plop05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
125357466
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
125357466
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125357466
Transporters [BR:
plop02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
125357466
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
125357466
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GFIT
Motif
Pfam:
Sugar_tr
MFS_1
TRI12
Motif
Other DBs
NCBI-GeneID:
125357466
NCBI-ProteinID:
XP_048210354
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Position
9:68322399..68338891
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AA seq
557 aa
AA seq
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MPATVDDILEQVGEFGWFQKQSFLILCLVSAALAPIYLGIVFLGFTPEHHCRSPGVAELS
ERCGWSRAEELNYTVPGLGAAGETHLRQCMQYAVDWNQSALGCVDPLAGLAANRSQLPLQ
PCQHGWVYDAPGSSIVTEFNLVCSDAWKVDLFQSGVNLGFFLSSLVIGYIADRFGRKLCL
LATSLVTAVSGVLTAVAPDYTSMLFFRLLQGMVSKGSWMAGYTLITEFVGSGYRRLVAIL
YQVAFTAGLVVLAGVAYAIPHWRWLQLAVSLPVFLFPLYYWCLPESPRWLLSQRRSAQAG
RIMEHIARKNGKPLPADLKMLSVDEDASEKRSPSFIDLFRTPNLRKHTCILMYLWFACAV
LYQGLIMHMGATGGNLHLDFLFSALVEFPAAFVILLTIDRAGRIYPMAISNTVVGAACLL
MVFIPQELHWLSITVACIGRMGVTIVLQMICLVNAELYPTFIRNLGVMVCSSLSDVGGIF
TPFLVFRLMDAWEDSPLILFGVLGLTAGGMTLLLPETKGVALPESVEDAENLRRRAKAKD
KENKTYLQVRMSQHTST
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaccgtggatgacatcttggagcaagtgggagagtttggctggttccagaag
cagtccttcctcatcctgtgcctggtctccgcggccttggcccccatctacctgggcatc
gtcttcctgggcttcacccccgagcaccactgccggagccccggggtggccgagctgagc
gagcgatgcggctggagccgggccgaggagctgaactacacggtgcccgggctgggggcc
gcgggcgagacccacctccgccagtgcatgcagtacgcggtggactggaaccagagcgcc
ctgggctgcgtggacccgctggccggcctggccgccaaccggagccagctgccgctgcag
ccctgccagcacggctgggtgtacgacgcgcccggctcctccatcgtcaccgagtttaac
ctggtgtgctccgacgcctggaaggtggacctcttccagtccggtgtgaacctgggcttc
ttcctgagctccctggtcatcggctacatcgcggacaggtttggccggaagctgtgtctg
ttggcgacctccctggtcaccgccgtgtccggggtgctgacggcggtggccccggactac
acgtccatgctgttcttccgcctgctgcagggcatggtcagcaagggcagctggatggcc
ggctacacgctgatcaccgagttcgtgggctcgggctacaggcggctggtggcgatcctg
taccaggtggcgttcacggcggggctggtggtgctggccggcgtggcctacgccatcccg
cactggcgctggctgcagctggccgtgtccctgcccgtcttcctcttcccgctctactac
tggtgcctgcccgagtccccgcgctggctgctgtcgcagaggaggagcgcgcaggccggg
aggatcatggagcacatcgcgcggaagaacggcaagcccctcccggccgatctgaagatg
ctctccgtcgacgaggacgcctcggaaaagcggagtccctccttcatagacctgttccgc
acgcccaacctgaggaagcacacctgcatcctgatgtacctgtggttcgcgtgcgccgtg
ctctaccagggcctcatcatgcacatgggcgccacgggcgggaacctgcacctcgacttc
cttttctcggcgctggtcgagttccccgcggccttcgtcatcctcctcaccatcgaccgc
gccggccgcatctaccccatggccatctccaacacggtggtcggtgccgcctgcctcctc
atggtcttcatcccccaagagctgcactggttgagcatcacagtggcttgcattggcaga
atgggggtcaccattgtgctacagatgatctgcctggtgaatgcggagctgtaccccacg
ttcatcaggaaccttggggtgatggtgtgctcttccctgagtgacgtgggtggcatcttc
acgcccttcctggtgttcaggctgatggacgcttgggaggactcgcccctcattttgttt
ggtgtgctgggcctgaccgctggaggaatgacgctgctgcttcccgagaccaagggggta
gcgctgcccgagagcgtggaggacgcggagaacctcaggaggagagccaaggccaaagac
aaagagaacaagacttaccttcaagtccggatgtcccaacacaccagcacctga
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