Perognathus longimembris pacificus (Pacific pocket mouse): 125358446
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Entry
125358446 CDS
T08928
Symbol
Mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01522
Endocrine resistance
plop04670
Leukocyte transendothelial migration
plop04912
GnRH signaling pathway
plop04915
Estrogen signaling pathway
plop04926
Relaxin signaling pathway
plop04933
AGE-RAGE signaling pathway in diabetic complications
plop05200
Pathways in cancer
plop05205
Proteoglycans in cancer
plop05219
Bladder cancer
plop05415
Diabetic cardiomyopathy
plop05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
125358446 (Mmp2)
09152 Endocrine system
04912 GnRH signaling pathway
125358446 (Mmp2)
04915 Estrogen signaling pathway
125358446 (Mmp2)
04926 Relaxin signaling pathway
125358446 (Mmp2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125358446 (Mmp2)
05205 Proteoglycans in cancer
125358446 (Mmp2)
09162 Cancer: specific types
05219 Bladder cancer
125358446 (Mmp2)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
125358446 (Mmp2)
05415 Diabetic cardiomyopathy
125358446 (Mmp2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
125358446 (Mmp2)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
125358446 (Mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125358446 (Mmp2)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
125358446 (Mmp2)
Peptidases and inhibitors [BR:
plop01002
]
Metallo peptidases
Family M10
125358446 (Mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Peptidase_M66
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
125358446
NCBI-ProteinID:
XP_048211534
LinkDB
All DBs
Position
10:complement(21783638..21806030)
Genome browser
AA seq
665 aa
AA seq
DB search
MEEPVAPVAPGALVRALRALCVLGCLLGRATTAPSPIIKFPGDVAPKTDKELAVQYLNTY
YGCPKESCNLFVLKDTLKKMQKFFGLSQTGELDQNTIETMRKPRCGNPDVANYNFFPRKP
KWDKNQLTYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFTRIHDGEADIMINFGRWE
HGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPF
LFNGREYNSCTDTGRKDGFLWCSTTYNFDKDGKYGFCPHEALFTMGGNADGQPCKFPFRF
QGTSYNSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLG
NKHESCTSAGRNDGKLWCATTSNYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDP
GALMAPIYTYTKNFRLSQDDIKGIQELYGASPDIDVGTGPTPTLGPVTPELCEKDIIFDG
IAQIRGEIFFFKDRFIWRTGTTTPGEKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFF
AGNEYWVYSASTLERGYPKPLTSLGLPPDLQRVDAAFNWSKNKKTYIFAGDKFWRYNEVK
KKMDPGFPKLIADAWNAIPDNLDAVVDLQGSGHSFFFKGAYYLKLENQSLKSVKFGSIKS
DWLGC
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaccggtggcgccagtggctccgggagccctagtgcgcgccctgcgcgccctc
tgcgttttggggtgcctgctgggccgcgccaccaccgcgccttctcccatcatcaagttc
cccggcgatgtcgcccccaaaacggacaaagaactggcggtgcaatacctgaacacctat
tatggctgccccaaggagagctgtaacctgttcgtgctgaaggacaccctcaagaagatg
cagaagttcttcgggctgtcccagacgggtgaacttgatcagaacaccattgagaccatg
cggaagccgcgctgtggtaacccagacgtggccaactacaacttcttcccccgcaagccc
aagtgggacaagaaccaactcacatacaggatcattggctacacacctgaccttgaccca
gagacggtagacgatgcctttgcccgggctttccaggtctggagtgatgtaactccccta
cggtttactcgcatccacgatggagaggctgacatcatgatcaacttcggtcgctgggag
catggagatggataccctttcgatggcaaggatggactcctggctcatgccttcgcccca
ggcactggtgttgggggagattctcacttcgatgatgatgaactctggactctgggggaa
gggcaagtggtccgtgtgaagtatgggaatgcggacggtgagtactgtaagttccccttc
ctgttcaatggccgggaatacaatagctgcactgacaccggccgcaaagatggcttcctc
tggtgctccactacctacaacttcgacaaggatggcaagtacggcttctgtccccatgaa
gctctgttcaccatgggtggcaatgcggacggacagccctgcaagttccccttccgcttc
cagggaacttcctacaacagttgcaccacggaaggccgcacagacggctaccgctggtgc
ggcaccaccgaggactatgatcgtgacaagaagtatggcttctgccctgagacagccatg
tctaccgtgggtgggaattcggaaggggccccctgcgtcttccccttcaccttcctgggc
aacaaacatgagagctgcaccagcgctggccgcaatgacgggaagctgtggtgtgcaacc
acttccaactacgacgatgaccggaaatggggcttctgcccagaccaaggatacagccta
ttcctggtggcagcccatgagtttggccacgccatgggcctggagcactcacaagaccca
ggggctctgatggcgcccatttatacctacaccaagaacttccgcctatcccaggatgac
atcaagggcatccaggagctctacggggcttctcctgacattgatgtgggtactggcccc
acccccacgctgggacctgtcactccggaactctgcgaaaaggacattatcttcgatggt
atcgctcagatccgtggcgagatcttcttctttaaagaccggtttatttggcggacgggg
acgacgacgcctggtgagaagcccatgggccccctgctggtggccacattctggcctgag
ctcccagaaaagattgacgctgtgtatgaagcccctcaggaggagaaggctgtgttcttt
gcagggaatgagtactgggtttattctgcaagcactctggagcgagggtaccccaagcct
ttgaccagcctagggctgcctcctgatctccaacgagtggacgctgcttttaactggagc
aagaataagaagacgtatattttcgccggagacaaattctggaggtacaacgaggtgaag
aagaagatggatcctggctttcccaagctcatcgcagatgcctggaatgccattcctgat
aacctggatgctgttgtggaccttcagggcagcggtcacagcttcttcttcaagggtgct
tattatctgaagttggagaaccaaagtctgaagagcgtgaagtttggaagcatcaagtca
gactggctgggctgctga
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