Perognathus longimembris pacificus (Pacific pocket mouse): 125358471
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Entry
125358471 CDS
T08928
Symbol
Nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04621
NOD-like receptor signaling pathway
plop04668
TNF signaling pathway
plop05152
Tuberculosis
plop05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
125358471 (Nod2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125358471 (Nod2)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
125358471 (Nod2)
09163 Immune disease
05321 Inflammatory bowel disease
125358471 (Nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
plop04054
]
125358471 (Nod2)
Pattern recognition receptors [BR:
plop04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125358471 (Nod2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_NLRC3
CARD
NLRC4_HD2
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
WHD_NOD2
LRR_4
AAA_29
nSTAND_NTPase5
HTH_NLRC5
AAA_16
AAA_22
NB-ARC
LRR_MHP1-HER1-GIP3
AAA_30
ABC_tran
nSTAND3
AAA_25
LRR_NLRC4
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
125358471
NCBI-ProteinID:
XP_048211582
LinkDB
All DBs
Position
10:complement(25614655..25651641)
Genome browser
AA seq
1013 aa
AA seq
DB search
MCSREEFQAQRSQLVALLVSGSLEGFECILDWLLSWEVLSWEDYEGLRLLGQPLSHSARC
LLDMIWSKGAWACEKLITAIQEAQASSHSPKVHACWNPHSRQPTQDLQSHRPAVVRKLYG
HVEAVLDLAQERGFLSQYECDEIRLPIFTSSQRARRLLDLATVKANGLAAFLLEHVWELP
IPWSLPFEASECQKYISKLRTTVSAQSRFLSTYDGAENLCLEDVYTENLLEVRTEVGMIG
PSQNSPATLGLEELFSTHSYLNKDADTVLVVGEAGSGKSTLLQRLHLLWAMGRDFQEFLF
VFPFSCRQLQCIAKPLSLRTLLFEHCCWPDAGQQDIFQFLLDHPHRVLLTFDGFDEFKFR
FTDQECHCSPQEPASVQTLLFNLLQGNLLKNAHKVLTSRPDAVSALLRKFVYNEYQLRGF
SEEAIKLYLRKCHREPGMADRLIQLLQSTSALHGLCHLPVFSWMVSKCHQELLLHKGGSP
TTTTDMYLLILQHFVLHASLPDSASCGLGPALLRSRLPTLMHLGRLALWGLATCRYVFSA
QQLQAAQVDSEDISLGFLVHAQSVPGSVAPLEFLHITFQCFFAAFYLVLSADTSAALLKH
LFSCHQPGSSPPARVLLRLCVQSSRLKEDSELALLKKAEPHNLHITAAFLAGLLSQEHQV
LLAQCQASEKALLRCHACARRCLARSLRKHFHSIPPAVPGEAKSMHAMPGFVWLIRSLYE
MQEERLAREAVRGLDIGHLKLTFCNVGPAECAALAFVLQHLQRPIALQLDHNSVGDIGVE
QLLPCLSICKALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCADSLARLLA
CKQDFLALRLGNNHITATGAQVLAQGLKDNTSLQFLGFWGNSVGDKGAQALAEALTDHRS
LTWLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHIGDEGVHLLAEGLKRNSSLRVL
NSCHKAFRQSVGSLPACNSVLEEPAEGTGMGRLPTAPTVWQAGCLFLFQGHHC
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcccgggaagagttccaagcacagagaagccagctggtggcgctgttggtctca
gggtccctggagggctttgagtgcatcctggactggctgttgtcctgggaagtgctctcc
tgggaggattatgaaggtctccgcctcttgggccaacctctctcccactcagccaggtgc
ctgctggacatgatctggagcaagggtgcttgggcctgtgagaagctcatcactgctatc
caggaggcacaggccagcagccacagccccaaggtacatgcctgctggaacccccattca
agacagccaacccaagacctgcagagtcaccggccagccgtggtcaggaaactctatggc
cacgtggaagcggtgctggacctggcacaggaacggggtttcctcagccagtacgagtgt
gatgaaatcaggctgccaatctttacgtcatcccagagggcaagaaggctactagatctt
gccacagtgaaggccaatggcttggctgccttccttctggaacatgtttgggagttgcca
atcccatggtccctgccttttgaggcttctgaatgtcaaaagtacatatccaagttgagg
accacggtgtctgctcagtctcgctttctcagcacttacgatggggcagagaatctttgc
ctggaggatgtctacacagagaatctcctggaggtcaggacagaggtgggcatgatcgga
ccatcacagaacagccccgccaccctaggcctggaggagctcttcagcacccacagctac
ctcaataaagatgccgacactgtgctagtggtgggtgaggcaggcagcggcaagagcacg
ctcttgcagcggctgcacctgctctgggctatggggcgagacttccaggaatttctcttt
gttttcccattcagctgccggcagctgcagtgcatagccaaaccgctgtccttaagaaca
ctactctttgaacactgctgttggcctgatgctggccagcaggatatcttccagtttctg
cttgaccaccctcaccgtgtcctgttgacctttgatggttttgatgagttcaagttcaga
ttcacagaccaagaatgtcactgctctccccaggagccggcatcagttcagactctgctt
ttcaaccttctgcagggcaatctgctgaagaatgcccacaaggtcctgaccagccgtcca
gatgcagtgtcagccctgctccggaagtttgtgtacaatgagtaccagcttaggggcttc
tcagaagaggccatcaagctgtacctgaggaaatgtcaccgtgaacctggcatggcggac
cgcctcatccagctgctacaatctacctcagccctgcatggcctgtgccacctccctgtc
ttctcctggatggtgtccaagtgccaccaggagctgctgctgcacaaagggggctcccca
acgaccaccacagacatgtaccttttgatcctgcagcatttcgtgctgcatgcctccctg
ccagattctgcctcctgtggcctgggcccagccctcctccgaagcaggctccccaccctg
atgcacctgggccgcctggctctctgggggctagccacgtgccgctatgtgttctcagcc
cagcagctccaggcagcacaggtcgactctgaagacatttctcttggcttcctggtgcat
gcccaaagtgtgccagggagtgtggcacccctggaattcctgcacattactttccagtgt
ttctttgcagccttctatttggtgcttagtgctgacacatcagcagctttactcaaacat
ctcttcagttgccaccagccaggcagctcaccaccagccagggtgctgctcaggctgtgt
gtccagagctccaggctcaaggaggacagcgagttggctctgctgaagaaggccgagcct
cacaacctgcacatcacagcagccttccttgcaggcctgctgtcccaggagcaccaggtc
ctgttggcccagtgccaggcatctgagaaggccctgctccgatgccatgcctgtgcccgc
aggtgcctggcacgaagcctccgcaagcatttccattccattccgccagcggtgcctggt
gaggccaaaagcatgcatgccatgcctgggtttgtctggctcatcaggagcctatatgag
atgcaggaggagcggctggcacgggaggctgtgcgtgggctggacatcgggcatctcaag
ctgacattttgcaatgtgggtccagctgagtgcgcggccctggcctttgtgctacagcac
ctccagcgacccatagccctgcagctggaccataattctgtgggagacattggtgtggaa
cagctgttaccttgtctcagcatctgcaaagctctctatttgcgagataacaatatctca
gacagaggcatctgcaagctcatcgaacatgctcttcactgtgagcagctacagaagtta
gctctgttcaacaacaagttgactgacggctgtgcggattccctggccaggctccttgca
tgtaaacaggacttcttggcattgaggcttggcaataaccacatcacagctacaggagcc
caggtgctggcccagggcctcaaagacaacacctccctgcagttcctggggttctggggc
aacagtgtgggtgacaaaggtgcccaagccctggctgaagccttaacagatcaccggagt
ctgacatggcttagcctggtggggaacaacattggcagtgtgggtgcccaagccttagca
ctcatgttggagaagaacatggcgttagaagagctttgtctggaggagaaccacatcggg
gatgaaggagtgcatttgctcgccgaaggactgaagagaaattcgagtttgagagtcctg
aactcctgtcacaaagccttcagacaaagtgtgggaagtctgccagcatgcaactcagtg
ttggaagagccagccgaaggaacagggatgggcaggttgccaactgcacccactgtgtgg
caggcagggtgcctcttcctgttccagggccaccactgctaa
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integrated database retrieval system
