Perognathus longimembris pacificus (Pacific pocket mouse): 125358584
Help
Entry
125358584 CDS
T08928
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125358584
09123 Folding, sorting and degradation
03018 RNA degradation
125358584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125358584
03041 Spliceosome [BR:
plop03041
]
125358584
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125358584
mRNA degradation factors
5'-3' decay
Lsm complex
125358584
Spliceosome [BR:
plop03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125358584
Complex C
U2 snRNP components
125358584
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
vATP-synt_E
RimP_C
DNA_pol3_tau_5
HMMR_N
Motif
Other DBs
NCBI-GeneID:
125358584
NCBI-ProteinID:
XP_048211785
LinkDB
All DBs
Position
10:36628591..36629048
Genome browser
AA seq
102 aa
AA seq
DB search
MVDDVDQQQTTNTVEEPLDLIKLSLDEHIYVKMRNNRELQGRLHAHDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKQSIPMFFVQGDGVILVVLPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgacgtggaccagcaacaaactaccaatactgtagaggagcccctagatctc
atcaagctcagcctggatgagcatatttatgtgaagatgaggaataacagagagcttcaa
ggcagattacatgctcatgatcaacatttaaatatgatactgggagatgtggaagaaact
gtgactaccatagaaattgatgaggaaacatatgaagagatatacaaatcaacaaaacag
agtatcccaatgttctttgtccagggagatggtgttatactcgttgtccttcctctgaga
gttggctga
DBGET
integrated database retrieval system
