Perognathus longimembris pacificus (Pacific pocket mouse): 125358825
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Entry
125358825 CDS
T08928
Symbol
Plxnd1
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-D1
KO
K06822
plexin D
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
125358825 (Plxnd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
TIG
Plexin_RBD
Sema
PSI
PSI_PlexinA-B
TIG_plexin
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
125358825
NCBI-ProteinID:
XP_048212256
LinkDB
All DBs
Position
10:complement(69630705..69665004)
Genome browser
AA seq
1948 aa
AA seq
DB search
MARRAAGGAALSARAAAPAPPPPPPRPPSPGPRGAPPRPPPPSPLPPPLPPLLLLLLLQL
PGAARVGALEIQRRFASPTPTNNFVLDGAAGTVYLAAVNRLYQLSGANLSLEAEAAVGPV
ADNPLCHAPQLPQSSCGHPRRLTDNYNKILQLDAGQGLVVACGTIYQGFCQLRRRGNISA
LAVHFPPAAPPAAPVSVFPSMLNVAANHPNASTVGLVLPPAAGAAGSRLLVGATFTGFGS
AFFPRNSSLEDHRFENTPEISIRSLDAGGDPAKLFTYDLNPSDDNIFKIKQGAKEQHKLG
FVRAFLHPPAPPPGAEPYAYLALNSEARAGDKESQARSLLARICLPRAADGDPEKLTESY
VQLGLQCAGGAGRGDLYSRLVSVFPERELLFAVFERTPAGGPAARAAPAALCAFRFADVH
AAIRAARTSCFVAPAPDVVAVLDSVVQGSGPTCEPKPNIQLLSEQLDCGAAHLQHPLSIL
QPLKAAPVFRAPGLTAVAVASIHNYTVVFLGTAHGRLLKINLNETMHVVSSRELTVAYGE
PVHPVMQFDPADPGYLYLMTSHQMARVKVAACEAYTACGDCVGAADAYCGWCTLETRCTL
RQDCANSSQPHFWTSASEGPGRCPSMSVLPAEIDVRQEYPGMILQISGSLPSLSGMEMAC
DYGGDIRTVARVPGPAYDHQLAYCNLLPRDHFPAFPDAQDHVTVEMALRVHGRHIVTANF
TIYDCSRVGHVQPREACTSCLSAPWPCFWCAQQHACVSNQSRCAASPNPTSPRDCPQTLP
MSLPPVPTGGSQDILVPVTSAAAFHGTALECSFGLEESFEAVWVNESAVRCNQVVLHTTQ
KSQVFALSLQLKGRPAQFLDSPDPMTVEVYNCATGSPDCSQCLGREDLGHLCAWSDGCRL
RGPLPAPSGPCPAPEIRLIEPLSGPLDGGTLLTIRGRNLGRRLSDVAHGVWVGSVACELL
ADRYTVSEEIVCRTGPAPGSFSAVVTVNASKEGHSRQRFSYVLPTVDSVEPAMGPKAGGT
RITVHGAHLHVGSELQVLVNHTDPCVELVRTDSSITCTVPGGSAPAPVPLCVRLERRGCL
QGNLTFRYMQNPVIVSISPRRSPVSGGRTITVAGERFHMVQNVSMAVHHIGREPTLCKVL
NATLITCPSPGALSSASAPVDFFINGRAYVDEAALAEEPPDPARARRGGHFHLDYLPNPQ
FSTAKRERWIKHHPGEPLTLVIHKEQDGLGLESHEYLIKIGQVACDIQIVSDRVIHCSVN
ESLGRAEGQLPITIQVGNFNQTIATLQLGGSETAIIVSIVICCVLLLLSVVALFVFCTKS
RRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYRHFVTR
TFFPKCSSLYEERYVLPSRAPGAPGGPPAQETHPLLGEWQVPEDRRPGMEEGVSLFSSLI
NNKHFLIVFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKELLVDLIDASASK
NPKLMLRRTESVVEKMLTNWMSICMYSCLRETVGEPFFLLLCAIKQQVNKGSIDAITGKA
RYTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPY
SQWPRAEDVDLEWFASSTQSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDK
KDTTLGRVKDLDTEKYFHLVLPTDELAEPKKSHRQSHRKKVXPEIYLTRLLSTKGTLQKF
LDDLFKAILSIREDKPPLAVKYFFDFLEEQAERRGISDPDTLHIWKTNSLPLRFWVNILK
NPQFVFDIEKTDHIDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQR
YYKQIQDMAPLSEQEMNAHLAEESRKYQNEFNTNVAMTEIYKYAKRYQPQVVAALEANPT
ARRTQLQHKFEQVVALMENNIYECYSEA
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgcgccgcgggcggcgcagcccttagcgcccgggccgccgcgcccgccccg
ccgccgccgccgccgcgcccgccctccccgggcccccggggcgccccgccgcgcccgccg
ccgccttctccgctcccgccgccgctcccgccgctgctgctgctgctgctgctgcagctg
cccggggcggcgcgcgtcggcgccctggagatccagcgccgcttcgcctcgcccacgccc
accaacaacttcgtcctggacggcgcggcgggcaccgtgtacctggcggccgtcaaccgc
ctgtaccagctgtcgggcgccaacctgagcctggaggccgaggcggccgtgggcccggtg
gccgacaacccgctgtgtcacgccccgcagctcccgcagtcctcgtgcgggcacccgcgg
cgcctgaccgacaactacaacaagatcctgcagctggacgccggccagggcctggtggtc
gcgtgcggcaccatctaccagggcttctgccagctgcggcgccggggcaacatctcggcc
ctggccgtgcacttcccgcccgccgcgccgcccgccgcgcccgtcagcgtcttccccagc
atgctgaacgtggccgccaaccaccccaacgcgtccaccgtggggctggtgctgccgccc
gccgccggcgccgcgggcagccgcctgctggtgggcgccacgttcacgggcttcggcagc
gccttcttcccgcgcaacagcagcctggaggaccaccgcttcgagaacacgcccgagatc
tccatccgctccctggacgccggcggcgacccggccaagctcttcacctacgacctcaac
ccttccgacgacaacatcttcaagatcaagcagggcgccaaggagcagcacaagctgggc
ttcgtgcgcgccttcctgcacccgcccgcgccgccgccgggcgccgagccctacgcctac
ctggcgctcaacagcgaggcgcgcgcgggcgacaaggagagccaggcgcgcagcctgctg
gcgcgcatctgcctgccccgcgccgccgacggcgaccccgagaagctcaccgagtcctac
gtgcagctgggcctgcagtgcgcgggcggcgcgggccgcggcgacctctacagccgcctg
gtctccgtcttccccgagcgcgagctgctcttcgccgtcttcgagcgcaccccggccggc
ggccccgcggcccgcgccgcccccgccgcgctctgcgccttccgcttcgccgacgtgcat
gcggccatccgcgccgcgcgcacctcctgcttcgtggcgcccgcgcccgacgtggtggcc
gtgctcgacagcgtggtgcagggcagcgggcccacctgcgagcccaagcccaacatccag
ttgctgtcggagcagctcgactgcggcgccgcccacctgcagcacccgctgtccatcctg
cagcccctgaaggccgcgcccgtgttccgggccccggggctcacggccgtggccgtggcc
agcatccacaactacacggtggtcttcctgggcactgcccacgggaggctgctgaagatc
aacctgaacgagaccatgcacgtggtgagcagccgcgagctgacggttgcctacggggag
cccgtgcaccccgtcatgcagtttgaccccgccgaccccggctacctctatctcatgacg
tcacaccagatggcgcgggtgaaggtcgcggcgtgcgaggcctacaccgcctgcggggac
tgcgtgggcgccgccgacgcctactgcggctggtgcacgctggagacccggtgcaccctg
cggcaggactgcgccaactccagccagccgcacttctggaccagcgccagcgagggccca
ggccgctgcccctccatgagcgtgctgcccgcggagatcgacgtgcggcaggagtacccg
ggcatgatcctgcagatctcgggcagcctgcccagcctcagcggcatggagatggcctgc
gactacgggggcgacatccgcaccgtggcccgcgtcccgggccccgcctatgaccaccag
ctggcctactgcaacctgctgccccgggaccacttcccagccttcccggacgcccaggac
cacgtgactgtcgagatggccttgagggtccacgggcgccacatcgtcacggccaacttc
accatctacgactgcagccgcgtggggcacgtgcagccccgggaagcctgcaccagctgc
ctgtcggccccgtggccctgcttctggtgcgcccagcagcacgcctgtgtctccaaccag
tcccgatgcgcagcctcaccgaaccccacgagcccgcgggactgcccgcagaccctgccc
atgtcgctgccgcccgtgcccaccggcggctcccaggacatcctggtgccggtgaccagc
gctgccgccttccatggcacagcgctggagtgcagcttcgggctggaggagagcttcgag
gccgtgtgggtgaacgagtctgcggtgcgctgcaaccaagtggtgctgcacaccacccag
aagagccaggtgtttgcactgagcctccagctgaaggggcggccagcccagttcctggac
agccccgaccccatgacagtcgaggtctacaactgcgccacgggcagccccgactgctcc
cagtgcctgggccgcgaggacctgggtcacctgtgcgcgtggagcgacggctgccgcctg
cggggacccctgccggcgccctcgggcccctgccccgccccggagattcgcctgatcgag
ccgctgagcgggcccctggacggcgggaccctgctcaccatccgcggccggaacctgggc
cggcgcctcagcgacgtggcccacggcgtgtgggtcggcagcgtggcgtgcgagctgctg
gcggaccggtacacggtgtcggaggagatcgtgtgccgcacagggccggcccccggctcc
ttctcggccgtggtgaccgtgaacgcctccaaggagggccactcgcggcagcgcttctcc
tacgtgctgcccaccgtggactcagtggagcctgccatgggccccaaggccgggggcacc
aggatcaccgtccacggggcccacctccacgtgggctccgagctgcaggtcctggtgaac
cacacggacccctgcgtggagctcgtgcgcacggacagcagcatcacgtgcacggtgccc
ggaggctccgcgcccgccccggtgcccctgtgcgtgcgtctcgagcgccggggctgcctg
cagggcaacctcaccttccgctacatgcagaaccccgtgatcgtctccatcagcccccgc
cgcagccccgtcagtggcggcaggaccatcacggtggccggcgagcgtttccacatggtc
cagaacgtgtccatggctgtccaccacatcggccgggagcccacgctgtgcaaggtcctc
aacgcgactctcatcacctgcccgtcgccgggggccctgagcagcgcctcggcgcccgtg
gacttcttcatcaacgggcgggcctacgtggacgaggcggcgctggccgaggagccgccg
gaccccgcccgggcgcggcggggcggccacttccacctggactacctccccaacccgcag
ttctccaccgccaagcgggagcgctggatcaagcaccaccccggggagccgctcacgctc
gtcatccacaaggagcaagacggtctggggctcgagagccacgagtacctcatcaagatc
ggccaggtggcctgcgacatccagatcgtctcggacagggtcatccactgctccgtcaac
gagtccctgggcagggcggaggggcagctgcccatcacgatccaggtggggaacttcaac
cagaccatcgccacgctgcagctggggggcagcgagacggccatcatcgtctccatcgtc
atctgctgcgtgctgctgctgctgtctgtggttgccctgtttgtcttttgcaccaagagc
cggcgcgccgagcgctactggcagaagacgctgcttcagatggaggagatggagtctcag
attcgcgaggagatccgcaagggctttgccgagctgcagacggacatgacggacctgacc
aaggagctgaaccgcagccagggcatcccgtttctggagtacaggcacttcgtgacccgc
accttcttccccaagtgctcctccctttatgaagagcgctacgtgctgccctcccgggcc
cccggcgccccgggcggcccccctgcgcaggagacgcacccgctgctgggggagtggcag
gtccccgaggaccggcggccaggcatggaggagggggtgagcctgttctcctcgctcatc
aacaacaagcacttcctcatcgtcttcgtgcacgcgctggagcagcagaaggactttgcc
gtgcgggacaggtgcagcctggcctccctgctgaccatcgcgctgcacggcaagctggag
tactacacgagcatcatgaaggagctgctggtggacctcatcgacgcctcggcctccaag
aaccccaagctcatgctgcggcgcaccgagtccgtggtggagaagatgctcaccaactgg
atgtccatctgcatgtacagctgcctgagggagacggtgggagagcccttcttcctgctg
ctgtgcgccatcaagcagcaggtgaacaagggctccatcgacgccatcacgggcaaggcc
cgctacacgctcaacgaggagtggctgctgcgggagaacatcgaagccaagccccggaac
ctgaacgtgtccttccagggctgtggcatggactccctgagcgtgcgggccatggacacg
gacacgctgacgcaggtgaaggagaagatcctggaggccttctgcaagaacgtgccctac
tcccagtggccgcgggccgaggacgtcgacctcgagtggttcgcctccagcacgcagagc
tacatcctgcgggacctggacgacacctcagtagtggaggatgggcgcaagaagctgaac
acactggcccactacaagatcccagaaggagcctcgctggccatgagcctcacagacaag
aaggataccacactgggcagagtgaaagacttggacacggagaagtatttccatttggtg
ctgcccaccgacgaactggcagagcccaaaaagtcccaccgacagagccaccgcaagaag
gtgnctcccgagatctacctgacccgcctgctgtccaccaagggcacgctgcagaagttt
ctggatgacctgttcaaggccatcctcagcatccgggaagacaagcccccgctggcggtg
aagtacttcttcgacttcctggaggagcaggcggagaggaggggcatctcggacccggac
acgctgcacatctggaagaccaacagcctccctctccgcttctgggtgaatatcctgaag
aacccccagttcgtctttgacatcgagaagacggaccacatcgacgcctgcctctcggtc
atcgcccaggccttcatcgacgcctgctccatctccgacctgcagctgggcaaggactcg
cccaccaacaagctcctgtacgccaaggagatccccgagtaccgcaagatcgtgcagcgc
tactacaagcagatccaggacatggcgccgctcagcgagcaggagatgaacgcgcacctg
gccgaggagtccaggaaataccagaacgagttcaacaccaacgtggccatgacggagatt
tacaaatacgccaagaggtaccagccccaggtcgtggcggccctggaggccaaccccacg
gcccgcaggacgcagctgcagcacaagttcgagcaggtggtggccctgatggagaacaac
atctacgaatgctacagcgaggcctga
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