Perognathus longimembris pacificus (Pacific pocket mouse): 125359285
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Entry
125359285 CDS
T08928
Symbol
Tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125359285 (Tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125359285 (Tdg)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
125359285 (Tdg)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125359285 (Tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
125359285
NCBI-ProteinID:
XP_048212907
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All DBs
Position
1:complement(13414266..13429418)
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AA seq
417 aa
AA seq
DB search
MDAPDAGSYSLEQAQAFYSFPFQQMMAEAPTMAVMTEQQMPVEVPAPAPAQEPAPEAPKG
RKRKARTTAPKKPVEPKKPVEPKKSADSKKSGKSKKSKEKQEKITDTFKVKRKVDRFNGV
SEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLN
HMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCI
YEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKD
LRDQLKGIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYGENPGGST
EPCSFSDGLTANGVQLQRESTFPDIPNGQWMTQSFTEQIPSFSNHCGTQEQEEGSCA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaccggacgcgggcagctattcgcttgaacaagctcaagctttttattcattt
ccatttcaacaaatgatggccgaagctcctaccatggcagtcatgactgagcaacaaatg
ccagtagaagttcctgcaccagctcccgcccaggaacctgcaccagaggctccaaaagga
aggaaaagaaaagctcgaacaacagcacccaaaaaaccagtagaaccaaaaaaacccgtg
gaacccaaaaaatctgctgactcaaaaaaatcgggcaagtcaaaaaaatcaaaagaaaag
caagaaaaaatcacagatacatttaaagtgaaaagaaaagtagaccggttcaatggtgtt
tctgaagcggaacttttgaccaagactctccctgatattttaactttcaatctggacatt
gtgattattggcataaacccaggactaatggctgcttacaaagggcatcattaccctgga
cctggaaaccatttctggaagtgcctgtttatgtctgggctaagtgaggttcagctgaat
cacatggatgaccacaccctgccagggaagtatggcattggtttcaccaacatggtggaa
aggacaacaccaggcagcaaggatctttccagtaaagaatttcgtgaaggagggcgtatt
ctagtacagaaattacagaaataccagccacgaatagcagtgtttaatggaaaatgtatt
tatgaaatttttagtaaagaagtttttggagtgaaagttaagaacttggaatttgggctt
caaccccataagatcccagacactgagactctgtgctacgtgatgccatcatccagtgca
cgatgtgctcagtttccccgagcccaggacaaagtccattactatattaagctgaaggac
ttgagagatcaattgaaaggcattgaacgaaacacagacgttcaggaggtgcagtataca
ttcgacctacagcttgcccaagaggatgcaaagaagatggcagtaaaggaagaaaagtac
gatccaggttatgaagctgcatatggaggcgcctacggtgaaaatccgggtggcagcacc
gagccctgcagcttctcagatgggctaacagccaacggggtgcagctacaacgagaatct
actttccctgacattcccaatgggcagtggatgacccagtcatttacagagcagatccct
tccttcagcaatcactgtgggacacaggaacaggaagaaggaagctgtgcttaa
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