Perognathus longimembris pacificus (Pacific pocket mouse): 125359335
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Entry
125359335 CDS
T08928
Symbol
Pkp1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125359335 (Pkp1)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
125359335 (Pkp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
V-ATPase_H_C
ARMC9_ARM
Arm_2
Motif
Other DBs
NCBI-GeneID:
125359335
NCBI-ProteinID:
XP_048212989
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All DBs
Position
11:complement(61125758..61169729)
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AA seq
727 aa
AA seq
DB search
MNHSPLKTALAYECFQDQDNSTLALPSDQKMKTGTSGRQRVQEQVLMTVKRQKSKSSQSS
TLSHSNRGSMYDGLADNYNNYGTTSRSSYYSKFQAGNGSWGYPIYNGTLKREPDNRRFSS
YSQMENWSRQYPRGGCATTGAGSDICFMQKIKASRSEPDLYCDPRGTLRKGTLGSKGHKT
TQNRYSFYSTCSAQKPVKKCPVRPPSCTSKQDPVYVPPISCNKDLSFGHSRASSKICSED
IECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP
NQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVNLLRRTGSTEIQKQLTGLLWNLSS
TDELKEELVSDALPVLTDRVIIPFSGWCDGNSNLSREAVDPEVFFNATGCLRNLSSADAG
RQTMRNYSGLVDSLMAYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYRQLEYN
TRNAYTEKSSTGCFSNRGDKMMNNNYDCPLPEEETNPKGSSWLYHSDAIRTYLNLMGKSK
KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLS
NMSRHPVLHRAMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYF
SSSMLNNVVNLCRSSGSPKAAEAARLLLSDMWSSKELQGVLRQQGFDRNMLGSLAGANNF
RNFTSRF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactcgccgctcaagaccgccctggcgtacgaatgcttccaggaccaggacaac
tccaccctggcgctgccctccgatcagaagatgaagaccggcacgtcgggccgccagcgc
gtgcaggagcaggtcctgatgaccgtcaagcgccagaagtccaagtcctcccagtcgtcc
accctgagccactccaaccgaggttccatgtacgatggcttggctgacaattacaacaac
tacgggaccactagcaggagcagctactactccaagttccaagcaggaaacggatcgtgg
ggatatccgatctacaacgggaccctcaaacgggagcccgacaacaggcgcttcagctcc
tacagccagatggagaactggagccggcagtacccccggggaggctgcgctaccacgggg
gcgggcagcgacatctgcttcatgcagaagatcaaggccagccgcagcgagcctgacctc
tactgcgacccaaggggcaccttgcgtaagggcacgctgggcagcaagggccacaagacc
acccagaaccgctacagcttttacagcacctgcagcgctcagaagcccgtgaagaaatgc
cccgtgcgcccgccctcctgcacctccaagcaagacccggtgtacgtgccgcccatctcc
tgcaacaaggacctgtcctttggccactcgagggccagctccaagatctgcagtgaggac
atcgagtgcagcgggctgaccatccccaaggctgtgcagtaccttagctcccaggatgag
aagtaccaggccatcggggcctactacatccagcatacctgcttccaggatgaatctgcc
aaacagcaggtatatcagctgggaggcatctgcaagctggtagatctcctccgcagcccc
aaccagaatgtccagcaggctgctgcaggggccctgcgtaacctggtgttcaggagcact
accaacaagctggagacccggaggcagaacgggatccgtgaggctgtcaacctcctaagg
agaactgggagcaccgagatccagaaacaactgactgggctgctctggaacctgtcttct
actgatgagctcaaggaagagctggtatccgatgccttgcctgttctgaccgaccgggtc
atcattcccttctctggctggtgtgatggcaacagcaacctgtcccgcgaagcggtggac
cccgaggtcttcttcaatgccacaggctgcctgaggaacctgagctccgccgatgcgggc
cgccagaccatgcgcaactattcagggctcgtggactccctcatggcctatgtgcagaac
tgtgtggcagccagccgttgtgatgacaagtccgtggagaactgcatgtgtatcctgcac
aacctctcctaccgcctggatgccgaggtccccacccgctaccgccagcttgagtacaac
acccgcaacgcctacaccgagaagtcctccaccggctgctttagcaacaggggtgacaag
atgatgaacaacaactatgactgccccctccctgaggaagagaccaaccccaagggcagc
agctggctctaccactcggatgccatccgcacctacctgaacctcatgggcaagagcaag
aaagatgccaccctggaagcctgcgctggtgccctgcagaacctgacggccagcaaggga
ctgatgtccagtggcatgagccagttgattggactgaaggaaaaaggcctgccacaaatc
gcccgcctcctgcaatccggcaactccgatgtggtccggtccggggcctccctcctgagc
aacatgtcccgccatccggtgctgcacagagcgatggggaaccaggtgttcccagaggtg
accaggctcctcaccagccacactggcaacaccagcaactcggaagacatcttgtcctcc
gcctgctacactgtgaggaacctgatggcctcccagcctcagctggccaagcagtacttc
tccagcagcatgctcaacaatgtcgtcaacctgtgccgcagcagtggctcacccaaggct
gcagaggccgcgcgactcctcctgtccgatatgtggtccagcaaggagctgcaaggtgtt
ctcagacagcaaggctttgacaggaatatgctaggaagcctggccggagccaacaacttc
aggaactttacctcccgattctaa
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