Perognathus longimembris pacificus (Pacific pocket mouse): 125359761
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Entry
125359761 CDS
T08928
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01524
Platinum drug resistance
plop04115
p53 signaling pathway
plop04210
Apoptosis
plop04215
Apoptosis - multiple species
plop05010
Alzheimer disease
plop05012
Parkinson disease
plop05014
Amyotrophic lateral sclerosis
plop05016
Huntington disease
plop05020
Prion disease
plop05022
Pathways of neurodegeneration - multiple diseases
plop05134
Legionellosis
plop05152
Tuberculosis
plop05160
Hepatitis C
plop05161
Hepatitis B
plop05162
Measles
plop05164
Influenza A
plop05168
Herpes simplex virus 1 infection
plop05169
Epstein-Barr virus infection
plop05200
Pathways in cancer
plop05222
Small cell lung cancer
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125359761 (Apaf1)
04215 Apoptosis - multiple species
125359761 (Apaf1)
04115 p53 signaling pathway
125359761 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125359761 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
125359761 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
125359761 (Apaf1)
05160 Hepatitis C
125359761 (Apaf1)
05164 Influenza A
125359761 (Apaf1)
05162 Measles
125359761 (Apaf1)
05168 Herpes simplex virus 1 infection
125359761 (Apaf1)
05169 Epstein-Barr virus infection
125359761 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
125359761 (Apaf1)
05152 Tuberculosis
125359761 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
125359761 (Apaf1)
05012 Parkinson disease
125359761 (Apaf1)
05014 Amyotrophic lateral sclerosis
125359761 (Apaf1)
05016 Huntington disease
125359761 (Apaf1)
05020 Prion disease
125359761 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
125359761 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125359761 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
125359761 (Apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
APAF1_C
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
NB-ARC
WD40_MABP1-WDR62_2nd
WHD_APAF1
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CARD
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Aladin
RMC1_N
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
WD40_RFWD3
eIF2A
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_WDR11_2nd
Ge1_WD40
Tricorn_2nd
Utp8_b_propeller
PEP5_VPS11_N
CARD_2
Beta-prop_DCAF4
Beta-prop_Nup120_160
AAA_16
Beta-prop_SPT8
Beta-prop_IFT122_2nd
Hira
AAA_22
ATPase_2
DUF2677
Beta-prop_RSE1_2nd
NPHP3_N
AAA_18
nSTAND6
WHD_Dark
NACHT
Motif
Other DBs
NCBI-GeneID:
125359761
NCBI-ProteinID:
XP_048213613
LinkDB
All DBs
Position
1:complement(16902061..16979642)
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISDGVLAISEEEEVKNQPTKHQRAAILIKMI
LKKDNYAYISFYNALLHEGYKDLAALLHSGIPVISSSSGKDSEGGITSYVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLSKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFPG
GVYWVAIGKQDKSGLLMKLQNLCTLLDQDGTFSQRLPLNIEEAKDRLRILMLHKHPRSLL
ILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVN
MKKADLPEQAHSIVKECKGSPLVVSLIGALLRDFPNRWDYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSIFQKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFRYYLHDLQVDFLTEKNRSQLQDLHKKMITQFKRYYQPHTLSPDQEDC
MYWYNFLAFHMASAGMHKELCALMFSLDWIKAKTELLGPAHLIHEFVEYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLRAKQEVDNGMLYLEWINK
KNIKNLSRLVVRPHTDAVYHACFSENGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSTDDRFIATCSVDKKVKIWNSVTGQLVHTYDEHSEQVNCCHFTNSSNHLLLATGS
SDFFLKLWDLNQKECRNTMFGHTNSVNHCKFSPDDELLASCSADGTLKLWDVRSANERKS
INVKHFFLNSEDSQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGVLAEIHTGHH
STIQYCDFSPQNHLAVVALSQYCVELWNIDSCLKVADCRGHLSWVHGVMFSPDGSSFLTS
SDDQTIRVWETKKVCENSAIVLKQEVDVMFQENEAMILAVDNRQHLQLINGKTGQIDYLT
EAQVSCCCLSPNLQYIAFGDEDGAIEILELLNNRVFRSRIEHKKAVRHIQFTADGKTLIS
SSDDSAIQVWNWQSEEYVFLQAHQETVKDFRPLTNSRLLSWSFDGTVKVWNIITGRIEQD
FVCHRGTVLSCDISSDTTKFSSTSADKTAKIWSFEHLSPLHELKGHSACVRCSAFSVDST
LLATGDDNGEIRIWNVSNGELLHLCAPISVEEAAATHGGWVTDLRFSPDSKVLVSAGGYL
KWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQILE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtttgcttcaacatagagaagctctggagaaagacatc
aagacctcctacatcatggatcacatgattagtgatggagttttagccatatcagaggag
gaagaagtgaaaaaccagcctaccaaacatcaacgagcagctattctcattaaaatgata
cttaaaaaagataattatgcctacatatcattctacaatgctctgctacatgaaggatat
aaagaccttgcagcccttctccatagtggcattcctgttatttcttcttccagtggcaaa
gactcagaaggtggaataacttcatatgtaagaacggtgctgtgcgaaggtggagtgccg
cagaggccagttgtctttgttactaggaaaaagctggtgaatgcaattcagcagaagctt
tccaaattgaatggtgaaccaggatgggtcacaatatatggaatggcaggctgtgggaag
tctgtattagctgcagaagctgttcgagatcattccctcttagaaggttgtttcccaggt
ggtgtatattgggttgcaattggaaagcaagataaatctgggcttctgatgaaactacag
aatctttgcacactgttggatcaggatgggactttctcccagaggcttccacttaatatt
gaagaggctaaagatcgtcttcgcattctaatgttgcacaaacacccaaggtctctgttg
atcttggatgatgtttgggatccttgggtattaaaggcatttgacaatcagtgtcagatt
ctgcttacaaccagagacaagagtgttacagattcagtaatgggtcctaaatatgtagtt
cctgtggagagtggcctaggaaaagaaaaaggacttgaaattttatccctttttgttaat
atgaagaaagcagatttgccagaacaagctcatagtattgtaaaagaatgtaaaggttct
cctcttgtggtgtctttaattggtgcacttttacgtgattttcccaaccgctgggattat
tacctcagacaacttcagaataagcaatttaagagaataaggaaatcttcatcatatgat
tatgaggctctagatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaa
gattattacacagatctttccatctttcagaaggatgttaaggtgcctacaaaggtgtta
tgcattctgtgggacatggaaactgaagaagttgaagacatactgcaagagttcgttaat
aaatctctcctattctgtgatcggaatgggaagtcatttcgttattatttacatgatctt
caagtagattttcttacagagaagaatcgcagtcagcttcaggatctacataagaagatg
atcactcagtttaagaggtattaccagccacatactctgtctccagatcaggaggactgc
atgtattggtacaattttctggcatttcacatggctagtgccggtatgcacaaagagctt
tgtgctttaatgttttctctggattggattaaagcaaaaacagaactcctaggtccagct
catctgattcatgaatttgtggaatatagacatatactggatgaaaaggattgtgcggtc
tgtgaaaattttcaggagtttttatctttaaatggacaccttcttggacggcagccattt
cctaatattgtacaattgggtctttgtgaaccagagacttcagaagtttatcagcaagca
aagctgcgggccaagcaggaggtcgataatggaatgctttacctggagtggataaacaaa
aaaaacatcaagaatctgtcccgcttggttgtccgcccccatacagatgctgtttaccat
gcatgcttttctgagaacggtcagagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaagctgaaacaggagagaaacttctagaaatcaaggctcatgaggatgaagtg
ctttgttgtgcattttctacagatgacagatttatagcaacctgttcagtggataaaaaa
gtgaagatttggaattctgtgactgggcaactagtacatacctatgatgagcactcagag
caagtcaactgctgccatttcacgaacagcagtaatcaccttctcttagccactgggtca
agtgacttcttcctcaaactttgggatttgaatcaaaaagaatgtcgaaatactatgttt
ggccatacaaattcagtcaatcactgcaaattttcaccagatgatgaacttttggctagt
tgttcagctgatggaacattaaagctttgggatgtgagatcagcaaatgagaggaaaagc
attaatgtgaaacacttcttcctaaattcagaagattctcaagaagatatggaagtcata
gtgaaatgttgttcctggtctgctgatggtgctaggataatggttgcagcaaaaaacaaa
atctttctttttgacatccataccagtggcgtcttggcagaaatccatacaggccatcac
agcaccatccagtactgtgacttttcccctcagaaccatttagcagtggtggccctgtcc
caatactgtgtggagttgtggaatatagactcctgcttaaaggtagctgattgcagagga
catttaagttgggttcatggtgtgatgttttcccccgatggatcatcctttttgacatct
tctgatgaccaaacaattagggtctgggaaacaaagaaggtatgtgagaactcagctata
gtgttaaagcaagaagtggatgttatgtttcaagaaaatgaagcaatgatccttgcagtt
gacaatagacagcatctacaactcattaatggaaaaacaggtcagatcgattacctgact
gaagctcaagttagctgttgttgtttaagtccaaatcttcagtacattgcatttggagat
gaagatggagccattgagattttagaacttctaaacaacagagtgttccgatccagaatt
gagcacaagaaagcagtacggcacatccagttcacagctgatgggaagacccttatttcc
agttctgatgactctgcaattcaggtttggaattggcagtcagaggaatatgtctttctg
caagcccatcaggaaacagtgaaagactttcggcccttaacaaattcaagattgctttct
tggtcatttgatggaacagtgaaggtatggaatattatcactggaagaatagaacaggac
tttgtgtgtcaccggggtacagtgctttcttgtgatatttcttctgatactaccaagttt
tcatctacctctgctgataagactgcaaagatttggagttttgaacacctttcccctctt
catgaattgaaaggccacagtgcctgcgtgcgctgctctgccttctctgtggacagtacc
ttgctggcaactggcgacgacaatggagaaatcaggatatggaatgtgtccaatggcgag
cttcttcatttgtgtgctcccatatccgtggaagaagcagctgctacccatgggggctgg
gtgaccgaccttcgcttctctccagacagcaaagtgcttgtctctgctggaggatatctt
aagtggtggaacgttgtcactggagaatcctcgcagaccttctacacaaatggaaccaat
cttaagaaaatacatgtgtcccctgacttcaaaacatatgtgactgttgataatcttggg
attttatatattttacagattttagagtaa
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integrated database retrieval system
