Perognathus longimembris pacificus (Pacific pocket mouse): 125360092
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Entry
125360092 CDS
T08928
Symbol
Nup210l
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125360092 (Nup210l)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125360092 (Nup210l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125360092 (Nup210l)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125360092 (Nup210l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_2nd
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_9th
Ig_NUP210_6th
Ig_NUP210_4th
Big_2
NUP210_Ig
T2SS-T3SS_pil_N
MAPKK1_Int
Motif
Other DBs
NCBI-GeneID:
125360092
NCBI-ProteinID:
XP_048214051
LinkDB
All DBs
Position
11:41200037..41289731
Genome browser
AA seq
1884 aa
AA seq
DB search
MTGCGMSECQGFGLFFCLSQHRLLWLSLFLLGTLANKLNVPQVLLPFGREPGRVPFLLEA
QRGCYTWHSTHHDAVTVEPVYENGTLCSQKAVLVAQSTQPTRLSSIILAREVVTDHELRC
DVKVDVIDSIEIVSRSRELYVDDSPLELMVRALDAKGNTFSSLAGMMFEWSIAQDNESAR
EELSRKIRILKYSEAEYSSPLYIAEMEKEDKQGDIILVSGIRTGAAVVKVRIYEQFYKNV
AAASIRLLVLENIFLIPSHDIYLLVGAYIKYQVAKMVQGRMTEVKFPLEHYTLELQDHRV
AHNGSLLGKVATLDEKTAMVTAHQLGQTNLVFVHKNVHMRSVSGLPNCTIYVVEPGFLGF
TIYPGDRWSLEVEQVYVITVEVFDKSSTKVYISDNLRIKYNFLKEYFEEQVTTVNGSYHV
LKTLRDGVVVINASLTSIIHQNNSIQPVKLLIKHQQEVKIYFPIKLKPSCLAFPHHPQEM
LYRYKVQVEGGSGNFTWTSSNETVAMVTTKGVVTAGQAWGNSTILARDVQNPFRYGEIKV
YVLKLNKIELLPYHADVEIGHTIEIPIAMYHINKETKETIAFTDCSHLSLDMNSDKQGVF
TFFKEGIQRPGPNHCSSIHIAAKSLGHTLVTVSVTENEEYLESSATVAAYEPLKALNPVE
VALVTWKSVKEMVFEGGPRPWILEPSRFFLELSVEETEKIGITEVRLPAKRKQNQYIYRV
LCLHLGEQVLTFRIGNHPGVLNPSPAIEAVQVRFICAHPASMSVTPVYKVPAGAQPCPLP
QHNKQLIPVSSLRDTVLELAVFDQHRRKFDNFSSLILEWKSSNETLAYFEDYKSMEMVAK
DDGSGQTQLHGHQILKVRQIKGTVLIGVNFVGYSEKKSPKEICNLPRSATVELLLVDDVA
VLPENATIYNHPDVKEIFSLVEGSGYFLVNSSEQDIVTIIYMEAESSVQLVPVHPGFLTL
EVYDLCLAFLGPATAHLRVSDIQELELDLIDKVEIGKTVLVTVRVLGSSKRPFQNKYFRN
MELKLQLASAIVTLTLMEEQDEYSENYIVRAITVGQTTLVAIARDKMGRKFTSAPRQIEV
FPPFRLVPEKMTLVPTNMMQVMSEGGPQPQSIIHFSISNQTVATVNRRGQVTGKVVGTAV
VHGTIQTVNEDTGKVIVFSQDEVQIEVVQLRAVRILAAATRLITATEMPVYVMGVTSTQT
PFSFSNANPGLTFHWSMSKRDVLDLVPRHSEVFVQLPVENNFAMVVRTKAAGRTSIKVTV
QCINSSLGQFEGNVLELSDEVQILVFEKLQLFYPECQPEQILMPMNSQLKLHTNREGAAF
VSSRVLRCFPNSSVIEEDGEGLLKAGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYL
RMSSHPKLYTTQGRTLSAFPLGMSVTFVVQFYNSIGEKFHTHNTQLYLALNRDDLLLIGP
GNRNYTYMAQAVNKGVTLVGLWDRRHPGMADYIPVAVEHAIEPDTNLTFVGDVICFSTHL
VNQHGEPGIWMISADNILQTDTVTGVGIARSPGTATIFHDIPGVVKTYREVTVNASSRLM
LSYDLKTYLTNTPNSTVFKLFITTGRNGVNLKGSCTPKQASAITKVLLPETLMLCHVQFS
NTLLDIPASKVFHVHSDYSMEKGVYVCLIKVRPQSEELLQALSMADTSVYGWATLVSERG
KNGMQRILIPFIPAFYINQSELILNHKDIGEIKVLGVDRVLENLQVSPSSPFLQVSGHKH
SPFTPGLDIYLIRAVNFTAFQQMQSPVFINISCALTRQSEAVLVRTMDKSGKDQCENSGV
FKRFVGSYQILLFTLFVVLASTAFIFLAYSAVLNKIQTVPVVYVPTIGTQQGSYTATCPP
SPFLSPQPPAAQSRLQHWLWTRRY
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgactggctgtgggatgtcagagtgccagggcttcggcctctttttctgcttgtctcaa
catcgcctcctttggctgtcgctgttcttgcttgggactctagcaaacaaacttaacgtg
ccacaggtgttgctacccttcggcagggagccaggccgcgtgcctttcctcctcgaggcg
cagcggggctgctacacttggcactctacccatcatgatgcagttactgttgagcctgta
tatgaaaatggcaccctctgttcccaaaaagctgttctcgttgcacaatctacccaacct
acacgactcagcagtattattcttgctcgagaagtagtaactgatcatgaactacgttgt
gatgtaaaagtggatgtgattgacagcattgaaattgtgtctcggtctcgggaactctat
gtagatgattcacctctggagctgatggtgagggcattggatgctaaaggaaacactttc
agtagtttggcagggatgatgtttgagtggagcattgcacaggataacgagtcagcaaga
gaagaactgtccagaaaaattaggattctgaaatactctgaggcagaatattcttcccca
ctctatatagctgagatggaaaaagaagacaaacaaggagatattattttggtgtctggg
attagaactggtgctgctgttgtaaaagttcgaatttatgaacagttctataagaacgtg
gcagcagcatcgattcgtctgctggttttggagaatatatttcttataccatcccatgat
atttatcttttagtaggagcatatattaagtatcaagttgcaaaaatggtccagggaaga
atgacagaggtgaaatttcccctggaacattatacactggaattgcaagaccacagagtt
gcacataatgggtctcttttggggaaagtagctacattggatgagaagacagccatggtg
actgcccaccaactgggccaaactaatcttgtctttgttcacaaaaatgtccatatgcga
tccgtatctggactcccaaattgcaccatatatgttgtagagcctggatttttaggcttc
accatttaccctggagaccgatggagtctagaggtggaacaggtgtatgtcatcacagta
gaagtgtttgacaaaagcagcacaaaggtctatatttcagataatctcaggattaagtac
aactttctgaaggagtactttgaagagcaagtaactactgtgaatggatcataccacgta
ctaaaaaccctgagagatggtgttgtagtgataaatgcatccctgacttccatcattcac
cagaataacagtattcagcctgtaaaacttctcatcaaacaccaacaagaagtgaagatt
tattttcccatcaagcttaagcccagctgtctggcatttcctcatcaccctcaggaaatg
ttatatcgttacaaagtacaggtagaaggtggtagtgggaacttcacttggacttcttct
aatgaaacagtagccatggtaaccactaaaggagttgtgactgcaggtcaggcctggggg
aacagtaccattttggccagagatgtacaaaatccatttcgatatggggaaattaaggta
tatgttctaaaactgaacaaaattgaactgttaccatatcacgctgatgtggaaattggc
catactatagaaatccctattgcaatgtatcatataaataaggagaccaaagagaccatt
gcattcacagactgctctcatttatccttggatatgaattcagataagcaaggagtcttt
acttttttcaaagaaggtattcaaagacctggaccaaatcactgttccagtatacacata
gcagccaaatctttaggccatactctggtgacagtcagtgtcactgaaaatgaagagtat
ttggaaagcagtgccacagtggctgcttatgagcccctaaaggccctaaaccctgtggaa
gtggctctggtgacctggaaatctgtgaaggaaatggtatttgaagggggcccacgtccg
tggatcttggagccctcccggtttttcctggagctaagcgtagaagagacagagaagatt
ggaataacagaagtccggcttccagctaagagaaaacagaaccagtatatctaccgagtc
ctgtgccttcatttaggggaacaggttctcacattccgaattggaaatcacccaggtgtt
ctgaaccctagtccagctatagaggctgtgcaggtgcgtttcatatgcgcccaccctgct
agtatgtcagtgacaccagtatataaggtgccagctggtgcccagccgtgccctctgcca
cagcacaacaaacaactgattcctgtatcaagcctgagggacacagtcctggaactagca
gtatttgatcaacataggagaaagtttgataatttcagttcactgatactagaatggaaa
tcttccaatgagacactagcctattttgaagattataagtcaatggagatggtagccaaa
gatgatggcagtggacagacccaactacatggtcaccagatacttaaagtacgtcagata
aaagggaccgtactcattggagtcaattttgtgggttattcagagaaaaagagcccaaag
gaaatttgcaacttgcccagatctgcaacagtggagctgctcttggtggatgatgtagct
gtactgccagagaatgccaccatatacaaccacccagatgtgaaggaaatatttagcctt
gtagaaggatctggttattttttagtcaacagcagtgaacaggatattgtcaccatcatt
tatatggaagcagaaagttctgtccagttagttccagtacatcctggatttctcaccttg
gaagtctatgatctgtgcttggctttcttaggcccagcaacagcccacctcagagtgtca
gacatacaagagctggagcttgatctaattgataaggttgagataggcaaaactgtatta
gtgactgtgagggttcttggctcttccaaacgtccattccaaaataaatacttcagaaac
atggagctcaaactccagttggcctctgctattgtcaccctgacactaatggaggaacag
gatgaatactctgaaaattatattgttcgagccatcactgttggacaaaccacacttgta
gctattgccagagacaagatgggaagaaaattcacatcagctccccgacaaattgaagtg
tttcctccattcagacttgtcccagagaagatgacactggttccaactaacatgatgcag
gtaatgtcagaaggtggccctcagccccaatccattattcacttctccatcagtaatcag
actgtggctactgttaataggcgggggcaagttacaggaaaagtggtcggtacagctgtg
gtccatggcaccatccagacagtcaatgaagatactggcaaagtgattgtgttttcccag
gatgaagtgcagattgaggttgttcagctacgggctgttcggatccttgcagctgcaact
cggctcatcacagccactgagatgcccgtttatgtcatgggagtgaccagtactcagacc
cccttttccttcagcaacgccaaccccgggcttacattccattggtccatgagcaaaaga
gatgtgttggatctagtgcccaggcattcagaggtttttgtgcagcttccagtggagaat
aactttgccatggttgtccgcacaaaagcagctggcagaaccagtatcaaagtcacagtt
cagtgcattaacagttccttggggcagtttgaggggaatgtgttggaactatccgatgaa
gttcaaattctggtttttgaaaaactccaacttttctatccagaatgccagcctgagcaa
attctaatgcctatgaattctcagctcaaactccacaccaacagggaaggggctgccttt
gtaagttcccgagttctcaggtgctttcctaactcatctgtcattgaagaggatggtgaa
ggactcctgaaagctggttccattgcaggtactgctgtgttggaagttacttctatagaa
ccttttggagtcaaccaaacaaccatcactggagtacaggtagcaccagtgacatacctg
cgaatgagcagccaccccaagctatatacaacccaaggaaggaccctatcagcctttccc
ttgggcatgtcagtcacttttgttgttcagttctataatagcatcggagaaaaattccac
acccacaatactcagctttatctggctctgaacagagatgacttgctgcttattggacca
ggaaacaggaattatacgtacatggcccaggctgtgaacaaaggggtgactctggtaggg
ctctgggaccggagacatccaggcatggcagattacattcctgtggctgtagaacatgct
attgaaccagacaccaatcttacttttgttggagatgtcatctgcttcagtactcacctt
gtcaaccagcatggtgagcctgggatatggatgatttctgctgacaatattctacagaca
gacactgtaactggagtaggcatagccaggagcccaggaactgcaacaatttttcatgac
atcccaggagtagtgaaaacatacagagaggtaacagtcaatgcatcatcaagattaatg
cttagttatgatctcaagacttacctcaccaacacacccaattcaactgtattcaaactc
ttcatcaccactggcagaaatggtgtcaatctcaaaggatcctgcaccccaaaacaggcc
tcagcaattacaaaagtacttcttccagagacactcatgttgtgccacgtgcaattcagt
aatactttgttagacattcccgcaagtaaagtctttcatgttcattcagactacagcatg
gagaaaggagtttatgtttgcctaatcaaggttcgtccacagtcagaggagctgctccag
gccctcagtatggctgatacctcagtctatggatgggcaacactggtcagtgaacgtggc
aagaatggaatgcaaagaatcctcattcctttcatcccagccttttacattaaccagtca
gaattgatccttaaccacaaagacattggtgagataaaagtactgggagtggacagagtt
ctagaaaacctacaggtttcccctagctccccttttttacaagtctctggccacaagcac
tctcccttcacaccaggcctggatatctacctgataagagcagtcaacttcactgccttc
cagcagatgcaatctcctgttttcattaatatttcctgtgcactcaccagacaaagtgag
gctgtgctagtgagaacgatggataaatctggtaaagatcagtgtgaaaattcaggtgtc
ttcaagcggttcgttggttcttaccagatcctcctctttaccctctttgtggtgctggca
tcaacagctttcatctttctagcatacagtgccgtcctaaacaagatacagactgttcca
gttgtttatgtaccaactataggaacacagcaaggttcttatactgccacatgtcctccc
tctcctttcttgagtccacagcctccagccgcccagagcagactacaacattggctatgg
acaagacggtattaa
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integrated database retrieval system
