Perognathus longimembris pacificus (Pacific pocket mouse): 125360532
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Entry
125360532 CDS
T08928
Symbol
Sharpin
Name
(RefSeq) sharpin isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04217
Necroptosis
plop04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125360532 (Sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125360532 (Sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125360532 (Sharpin)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
125360532 (Sharpin)
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GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
125360532
NCBI-ProteinID:
XP_048214475
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Position
12:605665..609898
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AA seq
396 aa
AA seq
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MAPPAGGAAAAAGSGPAAVLGAVHAAVRPLGAGPDAEAQLRRLQLSSDPARPGRFRLELL
GSGPGAVGLEWSLESVSYTVRGPSQHELQPPPGGPGPFSLQFLNPQEAQRWAALVQGATA
EGQNGSGSPALALGAEKCHASLPCPPVAPTPTASQLEVHLPQSPGDLAEKEELARRLAQA
VAGGDQKGAAQVAAILAQGHVALDIQLPEACFPPGPIRLQVTVEDATSAASSASPAHISL
QIHPHCTIAALQEQVFSEFGFPPAVQRWIIGHCLCMPERSLASYGVQQDGDPAYLYLLSV
PREAPGQFLIGVGRWGSACDSPECPSSAIGHSTQHSQMDEEPECLFPQSAGLPSAPKPPG
WPCPSCTFINAPSRPGCEMCSTQRPSAWDPLSAVST
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccggcgggcggggcggcggcggccgcaggctcgggccccgcggcggtgctc
ggggccgtgcacgcggcggtgcggccgctgggcgcggggccggacgcggaggcgcagctc
cggaggctgcagctgagctcggaccccgcgcggcccgggcgcttccgcctggagctgctg
gggtcggggcccggggcggtcggtctggagtggtccttggagtcagtttcctacacagtc
cgtggccccagccagcatgaactgcagcctccaccaggaggacctggacccttcagcctg
cagttcctcaacccccaggaagctcagcggtgggcagccctggtgcaaggtgccaccgca
gagggacagaatggcagtggcagcccagccctagccctgggtgcagaaaagtgccatgct
tccttgccctgtccccctgtggccccaacacccacagcatcccaacttgaggtgcatctt
ccccagagccctggagacttggctgagaaagaagagctggccaggcgcttggcccaggct
gttgcaggtggggaccagaaaggggcagcccaagtggcagcgatcctggcccagggtcac
gtggctctcgatatccagctcccagaagcctgcttcccacctggtcccatcaggctgcag
gtgacagttgaagatgccacatctgctgcatcctctgcgtctcccgcccacatttcactc
cagatccacccccactgcaccattgcagccctccaggagcaggtgttctcggaatttggt
ttcccaccagctgtgcagcgctggatcattgggcattgcctctgtatgcctgaacggagc
cttgcttcctatggggtccagcaggatggagaccctgcctatctctatttgctctcagtc
ccccgagaggccccaggtcagttcttgataggagtgggaaggtggggttcagcctgtgac
agccctgagtgcccttcctctgccataggacacagtactcaacactcccagatggatgaa
gaaccagaatgcttgtttccccaatcagcggggctgccctctgcccccaagccacctggc
tggccatgtccttcctgcaccttcatcaatgccccaagccgtcctggttgtgagatgtgc
agcacccagaggccaagtgcttgggaccctctctctgcagtctccacctag
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