Perognathus longimembris pacificus (Pacific pocket mouse): 125361812
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Entry
125361812 CDS
T08928
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04140
Autophagy - animal
plop05014
Amyotrophic lateral sclerosis
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125361812 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125361812 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
125361812 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125361812 (C9orf72)
Membrane trafficking [BR:
plop04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
125361812 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
125361812
NCBI-ProteinID:
XP_048216402
LinkDB
All DBs
Position
1:complement(125446746..125470068)
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AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRSAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEINIADTILNDDDIGDSCHEGFLLNAISSHLQTCGCSIVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVRQMPPCHEHIFNQRRYMRSELTAFWRATSEEDVAQDTIIYTDDSF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHCFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctctgcccgcccccatctccagctgttgcaaagacagagattgctttaagt
ggtgaatcacctttattggcagccacctttgcttactgggacaatattcttggtcctaga
gtaaggcatatttgggctccaaaaacagaacaggtacttctcagtgacggagaaatcact
tttcttgccaaccacaccctgaatggagaaattcttcgcagtgcagaaagtggggctata
gatgtcaagttttttgtcttgtctgaaaaaggagtaattattgtttcattaatctttgat
ggaaactggaatggagatcggagtacatatggactgtcaattatacttccacagacagaa
cttagtttctacctcccacttcacagagtgtgtgttgatagattaacacatattattcgg
aaaggaagaatatggatgcacaaggaaaggcaagaaaatgtccagaagattgtcttagaa
ggcacagagagaatggaagatcagggtcagagtattattcccatgcttaccggggaggtc
attcctgtaatggaactactttcatctatgaaatcacacagtgttcctgaggaaataaat
atagctgacaccatactcaatgatgatgatattggtgacagttgtcatgaaggctttctt
ctcaatgccatcagctcacacctacagacctgtggctgctccattgtagtaggtagcagt
gcagagaaagtaaataagatagtgagaacattatgcctttttctgacaccagccgagagg
aaatgctccagattatgtgaagcagaatcatcatttaaatatgagtcagggctctttgta
caaggcctgctaaaggattccactggcagctttgttctccccttccgacaagtcatgtat
gccccctatcccaccacgcacatcgacgtggatgtcaataccgtcaggcagatgccaccc
tgtcacgaacatatctttaatcagcgtagatacatgagatcagagctgacagcattctgg
agagccacttcagaagaagacgtggcccaggacaccatcatctacacagacgatagcttc
actcctgacttgaatattttccaagatgttctgcacagagacactttagtgaaagccttc
ttagatcaggtctttcatttgaagcctggtttatctctcaggagtactttccttgcacaa
tttctgctcgtccttcacagaaaagccttgacactaataaaatatattgaagatgatacg
cagaaagggaaaaagccttttaagtctcttcgcaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggcactagctgagaaaattaaaccaggcctacac
tgttttatcttcggaagacctttctacaccagtgtacaagaacgagatgttctaatgact
ttttaa
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