Perognathus longimembris pacificus (Pacific pocket mouse): 125362342
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Entry
125362342 CDS
T08928
Symbol
Fads2
Name
(RefSeq) acyl-CoA 6-desaturase
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00592
alpha-Linolenic acid metabolism
plop01040
Biosynthesis of unsaturated fatty acids
plop01100
Metabolic pathways
plop01212
Fatty acid metabolism
plop03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
125362342 (Fads2)
01040 Biosynthesis of unsaturated fatty acids
125362342 (Fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125362342 (Fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
plop01004
]
125362342 (Fads2)
Enzymes [BR:
plop01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
125362342 (Fads2)
Lipid biosynthesis proteins [BR:
plop01004
]
Desaturase
Front-end
125362342 (Fads2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
Jiv90
Motif
Other DBs
NCBI-GeneID:
125362342
NCBI-ProteinID:
XP_048217111
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All DBs
Position
13:54953266..54978957
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AA seq
444 aa
AA seq
DB search
MGKGGNQGEAAGEREAAKPTFRWEEIQKHNLRTDKWLVVDRKVYNVTAWAKRHPGGHRVI
AHYAGEDATDAFRAFHPDLDLVGKFLKPLLIGELAPEEPSLDRGKSAQITEDFRALKKTA
EDMNLFKTNHFFFFLLLAHIIVMEMIAWLILRYFGNGWIPTLITAFVLATSQAQAGWLQH
DYGHLSVYQKSKWNHVVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVKMLHVFV
LGEWQPLEYGRKKLKYLPYNHQHEYFFLIGPPLLIPMYFQYQIIMTMLIRKDWVDLVWAI
SYYIRFFSTYIPFYGVLGALVFLNFIRFLESHWFVWVTQMNHIVMEIDLDHYRDWFSSQL
AATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCTKHGIEYQEKPLL
RALLDIISSLKKSGQLWLDAYLHK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggggaagggggggaaccagggcgaggcggcgggcgagcgcgaggcggcgaagcccacc
ttccgctgggaggagatccagaagcacaacctgcgcaccgacaagtggctggtggtggac
cgcaaggtctacaacgtcaccgcgtgggccaagcggcacccgggcggccaccgggtcatc
gcgcactacgcgggggaggacgcgacggatgccttccgtgccttccacccggacctggac
ttggtgggcaagttcctgaagcccctgctgatcggggagctggcccccgaggagcccagc
ctggaccgcggcaagagtgctcagatcaccgaggacttccgggccctgaagaagactgcg
gaggacatgaacttgttcaaaaccaaccacttcttcttcttcctcctcctggctcacatc
atcgtcatggagatgattgcatggcttatccttcgttacttcggcaatggctggattcct
accctcatcacggcctttgtccttgctacctctcaggcccaagctggctggcttcaacac
gattacggccacctttctgtctaccagaagtccaagtggaatcacgttgtccacaagttc
gtcatcggccacttaaagggtgcctccgccaactggtggaaccatcgccatttccagcac
cacgccaaacccaacatcttccacaaggatccggatgtgaagatgctgcacgtcttcgtc
ctgggtgaatggcagcccctcgagtatggccggaagaagctgaaatacctgccttacaat
caccagcacgagtacttcttcctcatcgggcctccgctgctcatccccatgtacttccag
taccagatcatcatgaccatgcttatccgcaaggactgggtggacttggtctgggccatc
agctactacattcgcttcttctctacctacatccctttctatggcgtcttgggagccctc
gttttcctcaacttcatcaggttcctggagagccactggtttgtgtgggtcacgcagatg
aaccacatcgtcatggagatcgacctggaccactaccgagactggttcagtagccagctg
gcggccacctgcaacgtggaacagtccttcttcaatgactggttcagcgggcatctcaac
ttccagatcgagcaccacctcttccccaccatgccccggcacaacttgcacaagattgcc
ccgctggtgaagtcactgtgtaccaagcatggcattgagtaccaggagaagccactgctg
cgggccctgctggacatcatcagttccctgaagaagtcggggcagctgtggctggacgcc
tacctccacaaatga
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