Perognathus longimembris pacificus (Pacific pocket mouse): 125363299
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Entry
125363299 CDS
T08928
Symbol
Traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04064
NF-kappa B signaling pathway
plop04620
Toll-like receptor signaling pathway
plop04621
NOD-like receptor signaling pathway
plop04622
RIG-I-like receptor signaling pathway
plop04657
IL-17 signaling pathway
plop04668
TNF signaling pathway
plop04936
Alcoholic liver disease
plop05160
Hepatitis C
plop05161
Hepatitis B
plop05162
Measles
plop05164
Influenza A
plop05165
Human papillomavirus infection
plop05167
Kaposi sarcoma-associated herpesvirus infection
plop05168
Herpes simplex virus 1 infection
plop05169
Epstein-Barr virus infection
plop05171
Coronavirus disease - COVID-19
plop05200
Pathways in cancer
plop05203
Viral carcinogenesis
plop05222
Small cell lung cancer
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125363299 (Traf3)
04668 TNF signaling pathway
125363299 (Traf3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125363299 (Traf3)
04621 NOD-like receptor signaling pathway
125363299 (Traf3)
04622 RIG-I-like receptor signaling pathway
125363299 (Traf3)
04657 IL-17 signaling pathway
125363299 (Traf3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125363299 (Traf3)
05203 Viral carcinogenesis
125363299 (Traf3)
09162 Cancer: specific types
05222 Small cell lung cancer
125363299 (Traf3)
09172 Infectious disease: viral
05161 Hepatitis B
125363299 (Traf3)
05160 Hepatitis C
125363299 (Traf3)
05171 Coronavirus disease - COVID-19
125363299 (Traf3)
05164 Influenza A
125363299 (Traf3)
05162 Measles
125363299 (Traf3)
05168 Herpes simplex virus 1 infection
125363299 (Traf3)
05167 Kaposi sarcoma-associated herpesvirus infection
125363299 (Traf3)
05169 Epstein-Barr virus infection
125363299 (Traf3)
05165 Human papillomavirus infection
125363299 (Traf3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125363299 (Traf3)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
125363299 (Traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
MPS2
Spc29
ATG16
zf-RING_4
zf-RING_5
KxDL
Crescentin
GAS
FliJ
DUF1664
T3SSipB
DUF3450
LMBR1
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
125363299
NCBI-ProteinID:
XP_048218374
LinkDB
All DBs
Position
14:60880638..60966784
Genome browser
AA seq
567 aa
AA seq
DB search
MESSKKMDSAGALQPNPPLKLQSDRGPGSVFVPDQGGYKEKFVKPVEDKYKCEKCRLVLC
NPRQTECGHRFCESCMAALLSSSSPKCTACQESIMKDKVFKDNCCKREILALQIYCRNES
RGCAEQLMLGHLLVHLKNECQFEELPCVRAACKEKVQRRDLRDHVEKACKYREATCNHCK
SQVPMITLQKHEDTECPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKRYGCVF
QGTNQQIKAHEASSAVQHVNLLKEWSSSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaagtaaaaaaatggactctgctggcgccctgcaacccaacccaccactaaag
ctgcagtctgaccgtggccccgggtctgtgttcgtccccgaccagggaggctacaaggag
aagttcgtgaagccagtggaggacaagtacaagtgtgagaagtgccgcctggtactgtgc
aaccccaggcagaccgagtgtggacaccgcttctgtgagagctgcatggccgccttgctc
agcagctctagtccaaaatgtactgcgtgtcaagaaagcatcatgaaagacaaggtgttt
aaggataactgctgcaagagagaaattctggctctccagatctattgtcggaacgaaagc
agaggctgtgcagagcagttaatgctgggacatctgctggtgcacctgaaaaatgaatgc
cagtttgaggagcttccctgtgtgcgcgcagcctgcaaagaaaaagtgcagaggagagac
ctgcgtgatcacgtggagaaggcctgcaaataccgcgaggccacgtgtaatcactgcaag
agccaagtcccgatgatcacgctgcagaaacacgaagacacagagtgtccttgtgtggtg
gtgtcctgccctcacaagtgcagcgtccagactctcctgaggagcgagttgagtgcacac
ttgtcagagtgtgtcaatgcccccagcacctgtagttttaagcgctatggctgcgttttt
caggggacgaaccagcagatcaaggcgcacgaggccagctctgcggtgcagcatgtcaac
ctgctgaaggagtggagcagctccctggagaagaaggtttccttgctgcagaatgaaagt
gtagaaaaaaacaagagcatacaaagtttgcacaatcagatatgtagctttgaaattgaa
atcgagagacaaaaggaaatgttgcggaataatgaatccaaaatacttcatttacagcga
gtcattgacagccaagcggagaaactgaaagagctggacaaggagatccgccccttccgg
cagaactgggaggaagccgacagcatgaagagcagcgtggagtccctgcagaaccgcgtg
acggagctggagagcgtggacaagagcgcggggcaggcggcgcggaacacaggcttgctg
gagtcccagctgagcaggcatgaccagatgctgagtgttcatgacatccgcctggccgac
atggaccttcgcttccaggtcctggagaccgccagctacaatggcgtgctcatctggaag
atccgggattataagcgccggaagcaggaggccgtcatggggaagaccctgtctctctac
agccagcccttctacaccggctactttggctataaaatgtgtgcccgcgtctacctgaac
ggggatgggatggggaaagggactcacctgtcgctgttttttgtcattatgcgtggagaa
tatgacgctttgctgccttggccgtttaagcagaaagtgacgctcatgctgatggatcag
ggctcctcccggcgccacctgggcgacgccttcaagccggaccccaacagcagcagcttc
aagaagcccaccggggagatgaacattgcctccggctgccccgtcttcgtggcccaaacc
gttctggaaaacgggacgtatattaaagatgataccatttttattaaagtcatagtggat
acttcggatctgcctgacccctga
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integrated database retrieval system
