Perognathus longimembris pacificus (Pacific pocket mouse): 125363986
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Entry
125363986 CDS
T08928
Symbol
Tnfrsf11a
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04060
Cytokine-cytokine receptor interaction
plop04064
NF-kappa B signaling pathway
plop04380
Osteoclast differentiation
plop04917
Prolactin signaling pathway
plop05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125363986 (Tnfrsf11a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125363986 (Tnfrsf11a)
09150 Organismal Systems
09152 Endocrine system
04917 Prolactin signaling pathway
125363986 (Tnfrsf11a)
09158 Development and regeneration
04380 Osteoclast differentiation
125363986 (Tnfrsf11a)
09160 Human Diseases
09163 Immune disease
05323 Rheumatoid arthritis
125363986 (Tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
plop04050
]
125363986 (Tnfrsf11a)
04090 CD molecules [BR:
plop04090
]
125363986 (Tnfrsf11a)
Cytokine receptors [BR:
plop04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
125363986 (Tnfrsf11a)
CD molecules [BR:
plop04090
]
Proteins
125363986 (Tnfrsf11a)
BRITE hierarchy
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Gene cluster
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Motif
Pfam:
RANK_CRD_2
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
125363986
NCBI-ProteinID:
XP_048219311
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Position
15:49958123..49985183
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AA seq
606 aa
AA seq
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MSTWCHFSSQVALQVAPPCTRDRQYELHGRCCSRCEPGKYMSSKCTTTSDSVCLPCGPEE
YLETWNEEDTCLLHKVCDTGKGLVALDPGNRTAPRRCVCKAGYHWSQDCQCCRRNRECAP
GSGARHPLQLNMDTVCELCPPGQFSDTFSSTGRCKPWTNCTVLGKTETRRGTEKSDVVCS
SPPPGSPRMEPQYLPGLIVVLLFVSVVVLAAVAFGVYYRKKGKALTANLWHWVNDACGRL
SGNKEASGDSCLGGRSRASSPRDVGEGVLLLTLEQKTVPEDTCYPDGAGVWGHACAEGPP
RAQGEDAGVFSLVSEEETEGDPFRQIPTEDEYVDRPLQTPDSSRLPTQPGSKSTPPFSEP
LEVGENDRFSQCFLGTESLGDLESCVFTEPPCRTDWIPGSPEKYLGQQVGGNSGLPWGDS
AKSAEGCPGCGNLPREDAEPTLGSPKHEPLPQCAHGMGLPMEEVAEGVEGGDQPEDGAEE
GLTSTARGGAGAGGGPSDHPPASGTVTGNSNSTFISSGQVMNFKGDIIVVYVSQTSQEGA
AAAAGGPGGPEPEPMACPVQEETLGHPDSFAGNGPRFPDTCSSPGLPEPAAEKASRPVQE
QGAARA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctggtgtcacttttcttcccaggtggctttgcaggtggctcctccgtgcacc
agggacaggcagtatgaactgcatgggaggtgttgtagcaggtgtgaaccaggcaagtac
atgtcttctaaatgcactactacctctgacagtgtgtgtctgccctgtggcccggaggag
tacttggagacctggaatgaagaagatacatgcttgctgcataaggtttgtgacacaggc
aagggcctggtggccctggaccccggcaaccgcacggcgccccggcgctgcgtctgcaag
gctggttaccactggagccaggactgccagtgctgccggcggaaccgcgagtgcgcgccg
ggctccggcgcccgccaccccttgcagctgaacatggacaccgtgtgtgagctctgccct
cctggccagttctccgataccttttcttccacgggcagatgcaaaccctggactaactgt
accgtgcttggaaagacagaaacacgacgtgggacagagaaatcagatgtggtttgcagc
tctcccccacccggatcgccacggatggaaccccagtacctgcccggtttgattgttgtg
ctcctcttcgtgtctgtggtggttcttgccgctgtcgccttcggtgtttactacaggaag
aaggggaaagcactcacagctaatttgtggcactgggtcaatgatgcttgcggccgccta
agtggaaacaaggaagcctcgggggacagctgtctgggcgggcgctccagagcctccagc
ccgcgcgacgtgggcgaaggcgtgttactgctcactctggagcagaagacggttcccgaa
gacacgtgctacccggatggggctggtgtctggggacacgcgtgtgcagaaggcccaccc
cgtgcccagggcgaagatgctggcgtgttctccttggttagcgaggaggagacggagggg
gaccccttccgacagatccccacggaagatgagtacgtggatcggcctctgcagaccccg
gactcttcccggctccccacgcagccgggaagcaaatccacaccccctttctccgagccc
ctggaggtcggggagaatgaccgtttcagccagtgcttcctggggacggagagcctgggg
gatttggagagctgcgtcttcacagaacccccctgcaggactgactggattcccgggtcc
cccgaaaagtacttaggacaacaagtcgggggtaacagtggcctgccctggggggacagc
gccaagtcagcagagggctgcccgggctgcgggaacctgcccagagaggacgctgagccc
accctgggctccccaaaacatgaacccttaccccagtgcgcccacggcatggggcttcct
atggaagaagtagctgaaggagtagaagggggcgaccagcctgaggatggagccgaggaa
ggactaaccagcacagccaggggaggagcgggggctggaggtggccccagcgaccatcct
cctgcatctggcaccgtgacgggaaacagcaactccacgttcatttccagcgggcaggtg
atgaacttcaaaggcgacatcatcgtggtgtacgtgagccagacctcgcaggagggcgcg
gcggcggcggcggggggcccggggggccccgagcccgagcccatggcctgcccggtgcag
gaggagacgctgggacacccggactccttcgcgggcaacgggccgcgcttcccggacacc
tgctcgagccccgggcttcccgagccggcggcggagaaggcgtcgaggcccgtgcaggag
cagggcgcagcccgggcctga
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