Perognathus longimembris pacificus (Pacific pocket mouse): 125364054
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Entry
125364054 CDS
T08928
Symbol
Dsel
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
plop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125364054 (Dsel)
Enzymes [BR:
plop01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
125364054 (Dsel)
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GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
DUF4962
Motif
Other DBs
NCBI-GeneID:
125364054
NCBI-ProteinID:
XP_048219427
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Position
15:complement(52822113..52828729)
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AA seq
1205 aa
AA seq
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MALMCTGHFLFLILLVFGFTCDGSVGNYSEWAVFTKNIDEFTPKVKDFRPNQRPRRSMPH
PSLYFDAGEVQALRQKSRTSHLHLFRVIRNAVTVMLSNPTFYLPPPKHADFTAKWNEIYG
NNLPPLALYCLLCPEDKVAFEFVLDYMDRMASYKDWLVENAPGDEVPVGHSLTGFATAFD
FLYNLFDNHRRQRYLEKIWIVTEEMYEYSKVRSWGKQLLHNHQATNMIALLTGALVTGVE
KGSQANLWKQVVVDVMEKTMFLLNHVVDGSLDEGVAYGSYTAKSITQYVFLAQRHFNINN
LDNNWLKTHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDKFILKNGAGNWLAQ
QIRKHRPKDGPMVASSAQRWSTLHTEYIWYDAQLTPRPPAEYGTPQMHMFPNWGVVTYGA
GLPNTQTNTFVSFKSGKLGGRAVYDIVHFQPYSWIDGWRSFNPGHEHPDQNSFTFAPNGQ
VFVSEALYGPKLSHLNNVLVFAPSPSSQCNQPWEGQLGECGHWLKWMGEEVGDAAGEIIS
ASQHGEMLFVSGEAVSAYSSAMGLKSVYRSLLLLNSQTLLVVDHIERQEASPVNSVSAFF
HNLDIDFKYIPYRFMNRYNGAMMDVWDAHYKMFWFDPHGRSPVASIQEAEQAAEFKKRWT
QFVNVTFPMESTVTRIAYVFYGPYVNVSSCRFIDNSKSGLQISLNVNNTEHVVSLVTDYH
NLKTRFSYLGFGGFANVVNQGQITQFGVGAQAILTPVTHARVIFPFGFKFNLVAGLILCV
SLVILTFQWRFYLSFRKLMRWVLLLVIAMWFIELLDVWSTCTQPICAKWTRAEAEASQKA
ASLQGPHVLLPDVVIASLPGSGAEILKQLFFNSSDFLYIRVPTAYIDIPETDLEIDSFAD
ACEWKAADVHGGHFRLLRGWLQSLVLDTKLHLQNIHLHEPSKGKLAQYLPMGKDKKRKLK
RRESLPEQRSRMKGTFDREAEYIRALRRHLVYYPSARPVLSLSSGSWTLKLHFFQEVLGS
SMRALYIVRDPRAWIYSLLYGSKPSLYTLKNMPEHLAKLLKGKCNLNSGYAFEYELLKKE
LTKPKASAVSILSHLWLANTAAALRINTDLLPANYQLVKFEDIVLSPQQTTERIFAFLGI
PLSPATLNQILFATSTNLFYLPYEGEISPANINVWKRNLPRDEIKLIENICWTLMARLGY
PKFMD
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgatgtgtacaggacatttcctatttctaatactgctggtgttcggcttcact
tgtgacgggtctgtgggcaattactccgaatgggcagtcttcaccaagaatatagatgag
ttcacaccgaaagtgaaagacttcagacccaaccaaagacccaggagaagtatgcctcat
cccagcttgtatttcgatgccggggaagtccaggcgttgagacagaagtcccgcacgagc
cacctgcatcttttccgagtgatcagaaatgccgtgacggtcatgctttccaaccccacg
ttttacctacctccacccaagcacgccgacttcacggccaagtggaacgaaatctatggc
aacaacctgcctcctctagcactgtactgtctgctgtgcccagaagataaggtggccttt
gaatttgtcttggactacatggacaggatggctagctacaaggactggctcgtggaaaac
gcgccgggagatgaggttccagtcggccattccttaacaggctttgccactgcctttgac
tttttatataacctgtttgataatcatcggagacaaagatatctggaaaagatatggatt
gtgacggaagagatgtatgagtattccaaggttcgatcctggggaaaacaacttctccac
aaccaccaggctactaatatgatagcattacttactggagccctggtcaccggggtggag
aaaggatcacaagcgaacctatggaagcaggtggtcgttgatgtgatggaaaagaccatg
tttctcttgaatcatgtggtcgatggctctttggatgagggcgtggcctatgggagctac
acagcaaagtctattacgcagtatgtttttctggcacaacgccactttaacatcaacaac
ttggataacaactggctgaaaacgcacttctggttctattatgccaccctgttgccgggt
ttccaaagaacggtgggtatcgcagattccaattacaattggttttacggtcctgagagc
cagctggttttcttggataagttcatcttaaagaacggagcgggcaattggttagcgcag
cagatccgaaagcaccggccgaaagatggacccatggtggcctcctccgcccagagatgg
agcactctccacacagaatacatctggtatgatgcgcaactcaccccgaggccccccgct
gaatacggcaccccccaaatgcacatgttcccaaactggggcgtggttacttacggggca
gggctgccaaacacacagaccaataccttcgtgtcttttaaatctgggaagcttggggga
cgagcggtgtatgacatagttcacttccagccctactcctggattgacgggtggcggagc
tttaacccagggcatgaacatccagaccaaaactcatttacctttgcccccaatgggcaa
gtctttgtttccgaagctctttatggccctaagttgagccacctgaacaatgtcttggtg
ttcgccccctccccctctagccagtgtaatcagccctgggaagggcagctgggggaatgt
ggccactggctcaagtggatgggggaagaggttggtgacgcggctggggaaatcatctct
gcctctcaacatggcgagatgctgtttgtaagcggggaggccgtctctgcttattcctca
gcgatggggctgaagagcgtgtatcgttccttgcttctcttaaactctcagactctgctg
gtagtggatcacattgagaggcaagaggcttcccccgtaaattctgtcagtgccttcttt
cataatttggatattgacttcaagtacatcccctatcggttcatgaacaggtataacgga
gccatgatggatgtctgggatgcacactacaagatgttttggtttgatccacatggccgt
agccccgtggctagcatacaggaagcagagcaagcggctgagtttaagaaacggtggact
cagtttgtgaatgtcacgtttcccatggaatccacagtcacgagaattgcctatgtcttt
tacgggccctatgtcaatgtctccagctgcagattcattgataattccaagtccggactt
cagatctccctcaatgtcaataatactgaacacgttgtttctcttgtcacggactaccat
aatctgaagaccagattcagttacctggggttcgggggcttcgccaatgtggtgaatcaa
ggccaaataacccaatttggtgtgggtgctcaggccatcctgacgcccgtcacacacgct
agagttattttcccctttgggtttaaatttaatctcgtagctgggttgatcttgtgcgtc
agcttggtgattttaactttccagtggcggttttacctgtcctttagaaagctcatgcgt
tgggtccttctgctcgtcattgccatgtggtttatcgagctcctggatgtgtggagcacc
tgcactcagcccatctgtgccaagtggacccgggcagaggctgaggcgagccagaaggcc
gcgtctttgcaagggccccacgtccttcttcccgacgtggtcatcgcctcgcttcccggc
tcaggagctgagattctcaagcagctgtttttcaacagtagtgatttcctttacatccga
gttcccaccgcctacatcgatatccccgaaaccgacctcgagatcgactcgtttgccgat
gcttgcgagtggaaggcggcggatgtccacggcgggcatttccgtttactccgaggctgg
ttgcagtctttagtcctggacacaaaactacatttgcaaaacatccacctgcacgaaccc
agtaagggcaaactggcccagtatctcccaatgggtaaggacaagaaaagaaaattgaaa
aggagagagtctttgccagaacaaagaagtagaatgaaaggcacctttgaccgggaggct
gaatacattagggctttgagaagacacctggtctattacccgagtgcacggcctgtgctc
agtttaagtagtgggagctggacgttgaaactccatttttttcaggaagttctggggtct
tcgatgagggcgttatacatagtgagagaccctcgggcatggatttattccctgctgtac
ggtagtaaaccaagtctttacacattgaagaatatgccagaacacttggccaaactgtta
aaaggcaaatgcaacttgaattcagggtatgctttcgagtatgaactgttgaaaaaggaa
ttaacaaaacctaaagccagtgccgtctccatcttgtctcatctgtggctggcaaacacg
gcggcagccttgagaataaatacagatctgctccctgccaactaccagctcgtcaagttc
gaagacattgtgctttctcctcagcagactactgaaaggatttttgctttcctgggaatt
cctttgtctcctgctactttaaaccaaatattgtttgccacttccacaaacctcttttac
cttccttatgaaggggaaatatcaccggctaatattaatgtgtggaaacggaacttgccc
agagatgagattaaattaattgaaaacatctgctggacactgatggctcgcctaggatat
ccaaagtttatggactga
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