Perognathus longimembris pacificus (Pacific pocket mouse): 125365470
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Entry
125365470 CDS
T08928
Symbol
Rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00514
Other types of O-glycan biosynthesis
plop04330
Notch signaling pathway
plop05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
125365470 (Rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125365470 (Rfng)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125365470 (Rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125365470 (Rfng)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
125365470 (Rfng)
Glycosyltransferases [BR:
plop01003
]
Glycan extension
O-Glycan
125365470 (Rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
125365470
NCBI-ProteinID:
XP_048221524
LinkDB
All DBs
Position
17:complement(56018489..56021784)
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AA seq
328 aa
AA seq
DB search
MTRAGAALCRACLALAAALAALLLLPLPLPPPRAPAPAPAARSAPAPAGPRLRPDDLFIA
VKTTRRNHARRLRLLLRTWISRARRQTFIFTDGDDPELQLQAGGRVINTNCSAVRTRQAL
CCKMSVEYDTFIESGRKWFCHVDDDNYVNPEGLLQLLSTFSPSQDVYLGRASLDHPIEAT
ERVPGGGTVATVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDDCTVGYI
VEGLLGARLRHSPLFHSHLENLQRLPPEAVLRQVTLSYGGPENPQNVVSVAGSFSLQQDP
TRFQSVHCLLYPDTDWCPLKDGADPATW
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgccggagcggcgctgtgccgggcctgcctcgcgctggccgccgccctcgcc
gcgctgctgctgctcccgctgccgctgccgccgccccgcgccccggcgcccgccccggcc
gcccgcagcgccccggcccccgccggcccccgcctgcgccccgacgacctcttcatcgcc
gtcaagaccacccgccgcaaccacgcgcggcgcctgcggctgctgctgcgcacctggatc
tcccgggcccgccggcagacgttcatcttcaccgacggggatgacccggagctccagctg
caggcaggcggccgcgtcatcaacaccaactgctctgccgtgcgcacccgccaggccctc
tgctgcaagatgtcggtggagtacgacacgttcatcgagtctggccgcaagtggttctgc
cacgtcgatgatgacaactacgtgaatccggaaggcctgctgcagctgctgtccactttc
tcccccagccaggacgtgtacctgggccgggccagcctggaccaccccatagaagccacc
gagagggtcccaggaggcggaaccgtggccactgtcaagttctggtttgccaccggcggg
gcggggttctgcctgagcaggggcctggccctcaagatgagcccctgggccagcctaggc
agcttcatgagcaccgcggagcgcgtgcgcctgccggatgactgcaccgtgggctacatc
gtggaggggctgctgggcgcccgcctgcggcacagccccctcttccactcccacctggag
aacctgcagcggctgccaccggaggccgtgctccgacaggtcaccctgagctacggcggc
cctgagaacccgcagaacgtggtgagcgtggcggggagtttcagcctgcagcaggacccc
acacggttccagtctgtgcactgcctcctttacccggacacagactggtgtcccctgaag
gatggggccgaccccgccacctggtga
DBGET
integrated database retrieval system
