Perognathus longimembris pacificus (Pacific pocket mouse): 125365528
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Entry
125365528 CDS
T08928
Symbol
Vdr
Name
(RefSeq) vitamin D3 receptor
KO
K08539
vitamin D3 receptor
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04928
Parathyroid hormone synthesis, secretion and action
plop04961
Endocrine and other factor-regulated calcium reabsorption
plop04978
Mineral absorption
plop05152
Tuberculosis
plop05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
125365528 (Vdr)
09154 Digestive system
04978 Mineral absorption
125365528 (Vdr)
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
125365528 (Vdr)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
125365528 (Vdr)
09171 Infectious disease: bacterial
05152 Tuberculosis
125365528 (Vdr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125365528 (Vdr)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125365528 (Vdr)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plop03310
]
125365528 (Vdr)
Protein phosphatases and associated proteins [BR:
plop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125365528 (Vdr)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125365528 (Vdr)
Nuclear receptors [BR:
plop03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
125365528 (Vdr)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125365528
NCBI-ProteinID:
XP_048221617
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Position
1:55944672..56003571
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AA seq
456 aa
AA seq
DB search
MNRECESFCVDASVGPRSRPLSSTYLPPTPSGMEAMAASTSLPDPGDFDRNVPRICGVCG
DRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIG
MMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLSEEQQHIITILLEAHHKTYDPTYA
DFSQFRPPVRLDESEGSHSPRSTPSFSKDSSSSTSVDLYTSSLDIMEPSNFSYLDLNEED
PDDPSVTLGLSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTADDQIVLLKSSAIEVI
MLRSNQSFSMDDMTWDCGSQDYKYDFTDVTKAGHNQELIEPLIKFQVGLKKLNLHEEEHV
LLMAICIVSPDRPGVQDRKLIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLR
SLNEEHSKQYRCLSFQPGSSTKLTPLVLEVFGNEIS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgagagtgtgagtccttttgtgtggacgcgtcagtgggacctcgcagtagaccc
ttgagttccacttacctgccccctactccttcagggatggaggcaatggcagccagcact
tccctgcctgaccctggggactttgaccggaatgtaccccggatctgtggggtgtgcgga
gaccgagccaccggctttcacttcaacgctatgacctgtgaaggctgcaaaggcttcttc
cggcgcagcatgaagcggaaggcactgttcacctgtcccttcaatggggactgtcgcata
accaaagacaaccggcgccactgccaggcctgtcggctcaaacgctgtgtggacattggc
atgatgaaggaattcatcctgacagatgaagaggtgcagcgcaaacgagagatgatcctg
aagcggaaggaagaagaagctttgaaagacagcctgcgacccaagctgtcggaggaacaa
cagcacatcatcaccatcctgctggaggcccatcacaagacctatgaccccacctatgct
gacttcagccagttccggcctccagttcgtttggatgagagtgaaggaagccattctcca
aggtccacacccagcttctccaaagactcatcctcctcaactagtgtagatctctacacc
tcctctctagacattatggaaccctccaacttctcctacctggatctgaatgaagaagac
ccagatgacccctctgtgacactgggtctgtcccagctttccatgttgccccatctggct
gacctagtcagttacagcatccaaaaggtcattggttttgccaagatgatcccaggattc
agggatctcaccgctgacgaccagattgtgctgctcaagtccagtgccatcgaggtgatc
atgctgcgctccaaccagtctttcagcatggacgacatgacctgggactgtggcagccag
gactacaagtatgacttcactgacgtgaccaaagcgggacataaccaggagctgattgag
cccctcatcaagttccaggtagggctgaagaagctgaacttgcacgaggaggaacatgtc
ctactcatggccatctgcatcgtctccccagaccgccctggagtacaggaccggaagctg
atcgaggccatccaggaccgtctgtccaacacgctgcagacctacatccgctgccgtcac
ccgcccccgggtagccacctgctctacgccaagatgatccagaaactggccgacctgcgc
agcctcaacgaggaacactccaagcagtaccgctgcctctccttccagcccggcagcagc
acgaagctcacgcccctggtgctcgaggtgtttggcaatgagatctcctga
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