Perognathus longimembris pacificus (Pacific pocket mouse): 125366185
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Entry
125366185 CDS
T08928
Symbol
Smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04140
Autophagy - animal
plop05014
Amyotrophic lateral sclerosis
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125366185 (Smcr8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125366185 (Smcr8)
05022 Pathways of neurodegeneration - multiple diseases
125366185 (Smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125366185 (Smcr8)
Membrane trafficking [BR:
plop04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
125366185 (Smcr8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
125366185
NCBI-ProteinID:
XP_048222638
LinkDB
All DBs
Position
17:complement(13759162..13768684)
Genome browser
AA seq
935 aa
AA seq
DB search
MISAPDVVAFTKEDEYEEEAYNAPALPEEYSVPLFPFASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKTGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKVIGADKFLDEVEHIQDQANQTSTTSNPDESADSDLYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHMFRGDLCYLLTSQIDRA
LLKQQHVTNFLFEDFVEVDDRIVEKQENIPSQPSQDRLPTRTLEECPIPKVLISVGSYKS
SVESVLIKMDQEHGDEYKEVEVIESSSFDPQENLDYLDMDMKGSISSGESIEVLGTEKST
SVLSKSDSQASLTVPLSPQVLRSKAVSHRTISEDSIEVLSTCPSESLIPDDFKASYPSAI
NEEESYGDSEGVIHFQASIRPSELGEIREGSLENTPSQVDSSCCIGKEIEGQLVSFPTLV
HTLSDEDAVVSIPPQRFRQKDQGFHVDFAAENTNPSHRDSSCEVFPTSELDPSCLLASRD
VSKTSLDNYSDTTSYVSSVASTSSDKMSSAYPAGPSSERHRKRAGQNALKFIRQYPFAHP
AIYSLLSGRTLVVLGEDETIVRKLVTALSIFVPNNGRCAKPVKHWVSSPLHITDFQKWKL
IGLQRVASPASAGTLHALSRYSRYTSILDLDNKTLRCPLYRGTLVPRLADHRTQIKRGST
YYLHVQSMLTQLCSKAFLYTFCHHLHLPAHDKETQEVVASRQASFLKLNLGLVNEDVRVV
QYLAELLKLHYMQESPGTGHPLLRFDYVPSFLYKI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtagtagccttcaccaaagaagacgagtacgaagaagaggct
tacaatgcaccagccctgccagaggaatactcggtgccgctcttcccctttgccagccag
ggagccaacccgtggtctaaactgtccggggccaagttctcgcgggacttcatccttatt
tccgagttctctgagcaggtgggaccccaacccttgctgaccatccccaatgacaccaaa
gtttttggcacttttgatctcaattacttctccctgcggatcatgtctgtggattaccag
gcttcctttgtgggtcacccccctggttctgcctaccccaagctgaattttgtggaggac
tccaaggtggtgctgggagactccaaggaaggggcctttgcatatgtgcaccaccttact
ctctacgacctggaggcccgtggttttgtgaggcctttttgcatggcttatatttcagca
gaccagcataaaatcatgcagcaattccaggagctgtcagctgaattttcaaaagcatcc
gagtgcttgaaaacaggcaacaggaaggcatttgctggggagcttgaaaaaaagctcaaa
gacttggattacaccaggacagtgctgcacacagaaacggagatccagaagaaagctaat
gacaaaggcttttactcttctcaggcaattgagaaagccaatgaactggccagtgtggag
aaatccatcattgaacatcaagatctcctgaagcagatccgctcataccctcatcggaag
gtgataggggcagataaatttctggatgaggtggagcatatccaggatcaggccaaccaa
acatccactacctctaaccccgatgaatctgctgactcagatctttatacctgcagacca
gcttacactccaaaactcatcaaagcaaaatccaccaagtgttttgacaagaagttgaag
accttggaggagctctgtgatactgaatatttcactcagaccctggcccagcttagccac
atcgagcacatgttcagaggagacttgtgttacctcttgactagtcagattgacagagcc
cttttaaagcaacagcacgtaactaactttctctttgaagactttgtggaagttgatgat
aggatagtggagaaacaagagaatataccttctcagcccagtcaggacaggctgcctacc
aggactctggaagaatgcccaattcctaaagtgttaattagtgttggttcttacaagtcc
agtgtggagtctgtgttgatcaaaatggatcaggaacatggagatgagtacaaggaagta
gaagtgatagagtcaagcagttttgacccccaggaaaacctggattacctggatatggat
atgaaaggtagtatcagcagtggggaaagcattgaggttctgggcacagagaagtccacc
tctgtgctgtctaaatctgacagccaggccagcctcacggtgccattgagcccccaagtg
ctccggagcaaagctgtcagccaccggaccatcagtgaggacagtattgaagtcctgagt
acctgtccttctgagtccctcatccctgatgactttaaggccagctacccaagtgccatt
aatgaggaagaatcctatggagatagtgaaggggtaatccacttccaagcaagcatccgt
ccctcagaattgggtgagatccgggagggcagcttggaaaacactccatcccaagtagat
tcctcctgctgtattgggaaggagatcgaaggccagctggtgtcattccccactctagtc
cacactctctctgatgaggatgctgtggtgagcatccccccacagcgcttcagacagaag
gaccaggggttccatgtagattttgcagcagaaaacaccaatccttctcaccgagacagc
agttgtgaagtgttccctacttctgaattggacccaagctgcctactggctagtcgtgat
gtcagtaagaccagcctggacaactactcagataccactagctacgtgagcagtgtagca
tcaaccagctcagacaagatgtcctctgcttaccctgctggtccatcctcagagagacac
agaaagagggctggccagaatgccttaaaattcatccgccagtacccttttgcccacccg
gccatctactccctgctcagtggaaggacacttgtggtcctgggggaagatgagaccata
gtcaggaagcttgtgacagcactgtccatctttgttcccaacaacggccgctgtgctaag
cctgtgaagcactgggtgtcctcccctttgcacattacggattttcagaagtggaagctt
attggcctacagagagtggcctcccctgccagtgctggtactctgcatgccctgagccgc
tacagccgctacacaagcatcctggacctggacaacaaaaccctgcgctgccccttgtac
aggggcacgctggttccccgcctagccgaccaccgcactcagatcaagcggggcagcacc
tactacctgcatgttcagagcatgctcacccagctctgttctaaggccttcctttacacc
ttctgccaccacctgcacctgcctgcccatgacaaggagacacaagaagtggtggccagc
cgtcaggccagctttttaaaactgaacctgggcctggtgaatgaggatgtcagggtagtc
cagtacttggctgagctgctgaaactgcactacatgcaggagtctcctgggaccggccac
cccctgctcaggtttgactatgtccccagctttttgtacaaaatctga
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