KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125366560
Entry
125366560         CDS       T08928                                 
Symbol
Actg1
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082  ATP-dependent chromatin remodeling
plop04015  Rap1 signaling pathway
plop04145  Phagosome
plop04210  Apoptosis
plop04390  Hippo signaling pathway
plop04510  Focal adhesion
plop04517  IgSF CAM signaling
plop04518  Integrin signaling
plop04520  Adherens junction
plop04530  Tight junction
plop04611  Platelet activation
plop04613  Neutrophil extracellular trap formation
plop04670  Leukocyte transendothelial migration
plop04714  Thermogenesis
plop04810  Regulation of actin cytoskeleton
plop04814  Motor proteins
plop04820  Cytoskeleton in muscle cells
plop04919  Thyroid hormone signaling pathway
plop04921  Oxytocin signaling pathway
plop04971  Gastric acid secretion
plop05014  Amyotrophic lateral sclerosis
plop05100  Bacterial invasion of epithelial cells
plop05132  Salmonella infection
plop05135  Yersinia infection
plop05164  Influenza A
plop05205  Proteoglycans in cancer
plop05225  Hepatocellular carcinoma
plop05410  Hypertrophic cardiomyopathy
plop05412  Arrhythmogenic right ventricular cardiomyopathy
plop05414  Dilated cardiomyopathy
plop05416  Viral myocarditis
plop05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125366560 (Actg1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    125366560 (Actg1)
   04390 Hippo signaling pathway
    125366560 (Actg1)
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125366560 (Actg1)
   04518 Integrin signaling
    125366560 (Actg1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125366560 (Actg1)
  09143 Cell growth and death
   04210 Apoptosis
    125366560 (Actg1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125366560 (Actg1)
   04520 Adherens junction
    125366560 (Actg1)
   04530 Tight junction
    125366560 (Actg1)
  09142 Cell motility
   04814 Motor proteins
    125366560 (Actg1)
   04820 Cytoskeleton in muscle cells
    125366560 (Actg1)
   04810 Regulation of actin cytoskeleton
    125366560 (Actg1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    125366560 (Actg1)
   04613 Neutrophil extracellular trap formation
    125366560 (Actg1)
   04670 Leukocyte transendothelial migration
    125366560 (Actg1)
  09152 Endocrine system
   04921 Oxytocin signaling pathway
    125366560 (Actg1)
   04919 Thyroid hormone signaling pathway
    125366560 (Actg1)
  09154 Digestive system
   04971 Gastric acid secretion
    125366560 (Actg1)
  09159 Environmental adaptation
   04714 Thermogenesis
    125366560 (Actg1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    125366560 (Actg1)
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    125366560 (Actg1)
  09172 Infectious disease: viral
   05164 Influenza A
    125366560 (Actg1)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125366560 (Actg1)
   05135 Yersinia infection
    125366560 (Actg1)
   05100 Bacterial invasion of epithelial cells
    125366560 (Actg1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    125366560 (Actg1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    125366560 (Actg1)
   05410 Hypertrophic cardiomyopathy
    125366560 (Actg1)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    125366560 (Actg1)
   05414 Dilated cardiomyopathy
    125366560 (Actg1)
   05416 Viral myocarditis
    125366560 (Actg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plop03021]
    125366560 (Actg1)
   03019 Messenger RNA biogenesis [BR:plop03019]
    125366560 (Actg1)
   03036 Chromosome and associated proteins [BR:plop03036]
    125366560 (Actg1)
   03029 Mitochondrial biogenesis [BR:plop03029]
    125366560 (Actg1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:plop04812]
    125366560 (Actg1)
   04147 Exosome [BR:plop04147]
    125366560 (Actg1)
Transcription machinery [BR:plop03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125366560 (Actg1)
Messenger RNA biogenesis [BR:plop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125366560 (Actg1)
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125366560 (Actg1)
    NuA4 complex
     125366560 (Actg1)
  Chromatin remodeling factors
   BAF complex
    125366560 (Actg1)
   PBAF complex
    125366560 (Actg1)
   GBAF(ncBAF) complex
    125366560 (Actg1)
   SWR1 complex
    125366560 (Actg1)
Mitochondrial biogenesis [BR:plop03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125366560 (Actg1)
Cytoskeleton proteins [BR:plop04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125366560 (Actg1)
Exosome [BR:plop04147]
 Exosomal proteins
  Proteins found in most exosomes
   125366560 (Actg1)
SSDB
Motif
Pfam: Actin DUF6581
Other DBs
NCBI-GeneID: 125366560
NCBI-ProteinID: XP_048223309
LinkDB
Position
17:complement(55603007..55606941)
AA seq 375 aa
MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagaggaaatcgccgcgctggtgatcgacaacggctcgggcatgtgcaaggcgggc
ttcgcgggcgacgacgcgccccgggccgtgttcccgtccatcgtggggcggccgcggcac
cagggcgtcatggtgggcatggggcagaaggactcgtacgtgggcgacgaggcgcagagc
aagcgcggcatcctgacgctcaagtacccgatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcaccacaccttctacaacgagctgcgcgtggcccccgaggag
cacccggtgctgctcaccgaggcccccctgaaccccaaggccaaccgcgagaagatgacc
cagatcatgttcgagaccttcaacaccccggccatgtacgtggccatccaggccgtgctg
tcgctgtacgcctccgggcgcaccacgggcatcgtcatggactcgggcgacggcgtcacg
cacacggtgcccatctacgagggctacgccctgccccacgccatcctgcgtctggacctg
gcgggccgggacctgacggactacctcatgaagatcctgacggagcgcggctacagcttc
accaccacggccgagcgcgagatcgtgcgcgacatcaaggagaagctctgctacgtggcc
ctggacttcgagcaggagatggccaccgccgcctcctcctcctccctggagaagagctac
gagctgcccgacgggcaggtgatcaccatcggcaacgagcgcttccgctgccccgaggcg
ctcttccagccctccttcctgggtatggagtcgtgcggcatccacgagaccaccttcaac
tcgatcatgaagtgcgacgtggacatccgcaaggacctgtacgccaacacggtgctgtcg
gggggcaccaccatgtaccccggcatcgccgaccgcatgcagaaggagatcacggccctg
gcccccagcaccatgaagatcaagatcatcgcccccccggagcgcaagtactcggtgtgg
atcggcggctccatcctggcctcgctgtccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtcgggcccgtccatcgtccaccgcaaatgcttctag

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