Perognathus longimembris pacificus (Pacific pocket mouse): 125366863
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Entry
125366863 CDS
T08928
Symbol
Mtr
Name
(RefSeq) LOW QUALITY PROTEIN: methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00270
Cysteine and methionine metabolism
plop00450
Selenocompound metabolism
plop00670
One carbon pool by folate
plop01100
Metabolic pathways
plop01230
Biosynthesis of amino acids
plop04980
Cobalamin transport and metabolism
plop04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
125366863 (Mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
125366863 (Mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125366863 (Mtr)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
125366863 (Mtr)
04980 Cobalamin transport and metabolism
125366863 (Mtr)
Enzymes [BR:
plop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
125366863 (Mtr)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-GeneID:
125366863
NCBI-ProteinID:
XP_048223543
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Position
18:2289192..2335407
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AA seq
1267 aa
AA seq
DB search
MGSGDLSPALSPPGAMEQARGDDVEAILRKRIMVLDGGMGTMIQRYKLSEESFQGQEFKD
HARPLKGNNDILSITRPDVIYQIHKEYLLAGADIIETNTFSSTSIAQADYGLEHLAYRMN
KCSARVARKAAEEITLQTGIKRFVAGALGPTNKTLSVSPSVERPDYRNVTFDELVEAYQE
QARGLLDGGVDILLVETIFDTANAKAALFALQNLFEENYAPRPIFISGTIVDKSGRTLSG
QTGEAFVISVSHADPLCIGLNCALGATEMRPFIETIGKCTTAYVLCYPNAGLPNTFGDYD
ETPSIMAKHLKDFAVDGLVNVVGGCCGSTPDHIREIAEAVKHCKPRVPPAAVFEGHMLLA
GLEPFRIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALSVAKLQVEMGAQVLDINMD
DGMLDGPSAMTRFCNFIASEPDIAKVPLCIDSSNFGVIEAGLKCCQGKCIVNSISLKEGE
EDFLEKARKIKKFGAAVVIMAFDEEGQATETDIKINVCTRAYHLLVQKLDFNPNDIIFDP
NILTIGTGMEEHNLYAVNFIXATRVIKETLPGARISGGLSNLSFSFRGMDAIREAMHSVF
LYHAIKCGMDMGIVNAGNLPVYDDIHKELLQLCEDLIWNQDPEATEKLLRYAQTHGKGGK
KVIQTDEWRSGPVEERLEYALVKGIEKHIIEDTEEARLSQDKYPRPLNIIEGPLMNGMKV
VGDLFGAGKMFLPQVIKSARVMKKAVGHLIPFMEKEREESRALNGTVEEEDPYQGTIVLA
TVKGDVHDIGKNIVGVVLGCNNFRVIDLGVMTPCDKILKAALDHKADIIGLSGLITPSLD
EMIFVAKEMERLAIKIPLLIGGATTSRTHTAVKIAPRYSAPVIHVLDASKSVVVCSQLLD
ENLKDEYFEEIMEEYEDIRQDHYESLKERKYLPLSQARKNGFHIDWLSEPHPVKPTFLGT
RVFEDYDLRKLVDYIDWKPFFDVWQLRGKYPNRGFPKIFQDKTVGEEARKVYDDARAMLD
VLIAGRKLQARGVVGFWPAQSAQDDIHLYAEGAEPRASEPVATFHGLRQQAEKDPAGADP
YLCLSDFVAPLHSGVPDYLGLFAVACFGVEELSKAHEEQGDDYCSIMVKALGDRLAEAFA
EELHARVRRELWGYGSGEQLGPADLRRLRFRGIRPAPGYPSQPDHTEKLTMWRLAGVEQA
TGIRLTESLAMAPAAAVSGLYFSSPHSKYFSVGKISKDQIADYARRKSMPEAEAERWLGP
ILGYDVD
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgggctccggcgacctgtcccccgcgctgtcgccacccggcgcgatggagcaagcccgg
ggggacgacgtcgaagccattcttcgcaagaggattatggtgctggatggaggcatgggg
accatgatccagcggtacaagctaagtgaagaaagcttccagggtcaggagtttaaagac
cacgccagacccctgaaaggcaacaatgacattttaagtataactcgacccgatgtcatt
taccaaatccataaggagtacttgctggctggagcagacatcattgaaacaaataccttc
agcagcacgagcattgcccaagctgactacggcctggagcacttggcctaccggatgaac
aaatgctccgcacgcgtggccaggaaagccgcagaggagataacactgcagacaggtatc
aagaggtttgtggcaggagctttgggtccaactaataagaccctctccgtgtctccatct
gtggaaagaccagattataggaacgtcacatttgacgagcttgtcgaagcgtaccaggag
caggccagaggacttctggatggtggggttgacatcctgcttgttgaaacgattttcgat
accgccaatgccaaggcagctttgtttgcactccagaatctttttgaagagaattatgct
ccccggcctatttttatttcaggcacaattgttgataagagtgggcgtactctttctgga
cagacaggagaggcctttgtcatcagcgtgtctcatgcagacccactgtgcattggatta
aattgtgctctgggtgcaactgaaatgagacctttcattgaaaccattggaaaatgtacc
acagcctacgtcctctgttaccccaacgcaggtcttcccaacacgttcggtgactatgat
gaaacaccttccatcatggccaagcacctgaaggacttcgctgtagacggcctggtcaac
gtggttggggggtgctgtgggtcaacgccagatcatatcagggaaattgcggaagctgtg
aagcactgtaagcctcgggtcccccctgctgcagtgtttgagggacatatgttactggct
ggtctagaacccttcaggattggaccctacaccaatttcgttaacattggcgagcgctgt
aacgtggcaggatccaggaagttcgctaaactcatcatggcaggaaactatgaagaagcc
ctgagcgttgccaagctgcaggtggaaatgggagcccaggtgctggacatcaacatggac
gacggcatgctggacgggccgagtgcgatgaccagattctgcaacttcatcgcttctgag
cccgacatcgccaaggtccccttgtgcattgactcatccaattttggggtgattgaagca
ggactgaagtgctgccaagggaagtgcatcgtcaacagcattagtctcaaggagggagag
gaagacttcctggagaaggccaggaagattaagaagtttggagctgccgtggtgatcatg
gcttttgatgaagaaggacaggcaactgaaacagacatcaaaattaatgtgtgtacccga
gcctaccatctccttgtgcagaaactggacttcaatccaaatgacatcatctttgacccc
aacatccttaccattggcacggggatggaggagcacaacctgtatgctgtcaatttcatc
ncagccacgagggtcatcaaagaaactttacccggcgcgagaataagtggaggtctttcc
aacttgtccttctccttccgaggcatggacgccatccgagaggccatgcatagcgtcttc
ctttaccacgccatcaagtgtggtatggacatgggcatcgtgaatgccggcaacctcccg
gtgtacgatgacatccacaaggagctgctccagctctgtgaagacctcatctggaaccaa
gaccccgaggccaccgagaagctcctgcgctacgcccagactcacggcaaaggagggaag
aaagtcatccagacggacgagtggaggagcggccctgtggaggagcgcctggagtacgcg
ctcgtgaagggcattgagaagcatattatcgaggacaccgaggaggccaggctgagccag
gacaaatacccccggcctctgaatatcatcgaagggcccctgatgaacggcatgaaagtt
gtgggtgatctttttggagccggaaaaatgtttctacctcaggtcatcaagtcggctcgg
gtgatgaagaaggccgtgggccacctcatccccttcatggagaaagagcgagaagaaagc
agagcgctcaatggcactgtggaggaagaggacccctaccaaggcaccatcgtgctggcc
accgtgaagggggacgtccacgacatcggcaagaacatagtgggcgtggtcctgggctgc
aataacttcagagttattgatttaggcgtcatgactccctgcgacaagatcctgaaagct
gcccttgaccacaaagcagacataatcggcctctcaggcctcatcactccttccttggat
gagatgatttttgtggccaaggagatggagaggctagcgatcaagatcccgctgttgatc
ggcggcgccaccacatcaagaacccacactgcagtgaaaatagccccccggtacagcgca
cctgtgatccacgtcctggatgcgtccaagagtgtggtggtgtgttctcagctgttagat
gaaaatctgaaggatgagtactttgaggaaatcatggaagaatatgaagacattagacag
gaccattatgaatctctcaaggagaggaaatacttaccattgagtcaagccagaaaaaat
ggcttccacatcgactggctgtcggagcctcacccagtgaagcccaccttccttggcacc
cgggtcttcgaggactacgacctgcggaagctggtggactacatcgactggaagcctttc
tttgatgtgtggcagctccggggcaagtaccccaaccgaggcttccccaagatatttcag
gacaagacagtgggcgaggaggccaggaaggtgtacgacgacgcccgggccatgctggac
gtcctgatcgccgggcggaagctgcaggcccgcggcgtggtgggcttctggcccgcgcag
agcgcgcaggacgacatccacctgtacgccgagggggcggagccccgcgcctcggagccc
gtcgccaccttccacggcctgcggcagcaggccgagaaggaccccgcgggcgcggacccg
tacctctgcctgtccgacttcgtggcgccgctgcactcgggcgtgcccgactacctgggg
ctgttcgccgtggcgtgcttcggcgtggaggagctgagcaaggcccacgaggagcagggc
gacgactactgcagcatcatggtcaaggcgctgggggaccggctggccgaggccttcgcc
gaggagctgcacgcgcgagtgcggcgggagctgtggggctacggcagcggcgagcagctg
ggccccgccgacctgcgccggctccgcttccgcggcatccggcccgcgcccggctacccc
agccagcccgaccacacggagaagctcaccatgtggcgcctggccggcgtcgagcaggcc
acgggcattcggctgaccgagtccctggccatggcccccgccgccgccgtgtccggcctc
tacttctccagcccgcactccaagtacttctccgtggggaagatctccaaggaccagatc
gcggattacgcgcggaggaagagcatgcccgaggccgaggcggagcgctggctggggccc
attttgggatacgacgtggactaa
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