Perognathus longimembris pacificus (Pacific pocket mouse): 125367524
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Entry
125367524 CDS
T08928
Symbol
Hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00280
Valine, leucine and isoleucine degradation
plop00650
Butanoate metabolism
plop00900
Terpenoid backbone biosynthesis
plop01100
Metabolic pathways
plop03320
PPAR signaling pathway
Module
plop_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
125367524 (Hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125367524 (Hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125367524 (Hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125367524 (Hmgcs1)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
125367524 (Hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Cullin
Motif
Other DBs
NCBI-GeneID:
125367524
NCBI-ProteinID:
XP_048224175
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All DBs
Position
19:complement(24983265..25001261)
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AA seq
518 aa
AA seq
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MPGSLPLNTEACWPKDVGIVALEIYFPSQYVDQVELEKYDGVDAGKYTIGLGQAKMGFCT
DREDINSLCLTVVQNLMERNSLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDI
EGIDTTNACYGGTAAVFNAINWIESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALL
IGPNAPLVFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKI
RAQWQKEGKDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEA
FGDIKLEDTYFDRDVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQF
SPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTCVSP
DVFAENMKLREDTHHLANYIPQGSVDSLFEGTWYLVRVDEKHRRTYARRPTPNDHSLDEG
LVHSNLATEHIPSPAKKVPRLPATAAEPEAAVISNGEH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcacttcctttgaatacagaagcttgttggccaaaagatgtgggaattgtt
gcccttgaaatctattttccttctcaatacgttgatcaagtagagttggaaaaatatgat
ggtgtagatgctggcaagtatactattggcttgggccaggccaagatgggcttctgtaca
gatcgagaagatatcaactctctttgcctgactgtggttcagaatttgatggagagaaac
agcctttcctatgattgtattgggcggctagaagttggaacagagacaatcattgacaaa
tcaaaatcggtgaagacgaatttgatgcagctgtttgaggagtccgggaatacagatata
gaaggaatcgatacgactaatgcctgctacggaggcacagctgctgtcttcaatgccatt
aactggattgagtccagctcttgggatggacgatatgcactggttgttgccggagatatt
gctatatatgccacaggaaatgcccgacccacaggtggagttggagccgtggctctgctc
attggcccaaatgctcctttagtttttgagcgtgggcttcgtgggacacatatgcaacat
gcctatgacttttacaagcctgatatgctttctgagtatcccatagtagatggaaaactc
tccattcagtgctacctcagtgcattagaccgctgctattctgtctaccgcaaaaagatc
cgagcccagtggcagaaagagggaaaggataaagattttactttaaatgattttggcttc
atgatctttcactcaccatattgtaaactggttcagaagtctctggctcggatgttactg
aatgactttcttaatgaccagaacagagataaaaatagcatctacagtggcttggaagcc
tttggggatattaaattagaagacacttactttgacagagatgtggaaaaggcatttatg
aaggctagtagtgaactatttaaccagaaaacaaaggcatctttgcttgtatcaaatcaa
aacggaaacatgtatacatcatcagtatatggttcccttgcttctgttctagcacagttc
tcacctcagcagttggcaggaaagaggattggagtgttctcttatggttcgggcttggct
gctaccctgtattctcttaaagttacacaagatgccacaccagggtctgctcttgataaa
ataacagcaagtttgtgtgatcttaaatcaagactagactcaagaacttgtgtgtctcca
gatgtttttgctgaaaacatgaagctcagggaggacactcatcacttggccaactatatt
ccccagggttcagtagactcactgtttgaaggaacatggtacctagttagagtggatgag
aagcacaggagaacttatgcccgacgccctactccaaatgatcacagtttggatgaagga
cttgtacattcaaacctagcaactgagcatattccaagccctgctaagaaagtgccaaga
ctccctgcaacggcagcagaacccgaggctgctgtcattagtaatggggaacattaa
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