Perognathus longimembris pacificus (Pacific pocket mouse): 125368251
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Entry
125368251 CDS
T08928
Symbol
Trpm4
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4 isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04911
Insulin secretion
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
125368251 (Trpm4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125368251 (Trpm4)
Ion channels [BR:
plop04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125368251 (Trpm4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
125368251
NCBI-ProteinID:
XP_048225050
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All DBs
Position
20:23153530..23184263
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AA seq
1207 aa
AA seq
DB search
MVATDKEQSWIPKIFRKKICTTFIVDLEDPGGSVCQCGRPRSAHPAVAVEDAFGAAVVTA
WDGDVHTTEKPTDAYGDLDFSGSGRRPSNFLRLSDRTDPATVYSLVTRTWGFRAPNLVVS
VLGGSGGPVLQTWLQDLLRRGLVRAAQSTGAWIVTGGLHTGIGRHVGVAVRDHQTASTGG
SKVVAMGVAPWGVVRNRDTLVNPKGSFPARYRWRGDPEDGVEFPLDYNYAAFFLVDDGTH
GRLGGENRFRLRFESYVAQQKTGVGGTGIDIPVLLLLIDGDEKMLKRIEDATQAQLPCLL
VAGSGGAADCLAEILEDTLAPGSGVTRRGEARDRIRRFFPKGDPEVLQAQVERIMTRKEL
LTVYSSEDGAEEFETIVLRALVKACRSSEASAYLDELRLAVAWNRVDIAQSELFRGDIQW
RSFHLEASLMDALLNDRPEFVRLLISHGLSLGHFLTPLRLAQLYSAVPPNSLIRSLLDQA
SHGVGTKAPPIKDRVEEPRLPNVGQVLRTLLGETCAPRYPARDTQDPHPGQGYRESECLL
SDWTNSQPSLDSDFVQAPWSDLFLWAVLLNRAQMALYFWEKGSNSVASALGACLLLRVMA
RLEPEAEEAARRKDLATKFEGMSVDLFSECYHNSERRAARLLLRRCPLWGDATCLQLAMQ
ADARAFFAQDGVQSLLTQKWWGEMDSTTPIWALVLTFFCPPFIYTNLITFRKSEEEPLQK
DPDFDMDRGVNGEGPAGPLNPPEKVPRRRSQQPGCCPRRGCLCRWSYFWGAPVTAFLGNV
VSYLLFLLLFARVLLIDFHPGAPGLLELLLYFWAFTLLCEELRQGLGGGWGSLASGGPGP
GQAPLRHRLHLYLSDTWNQCDLLALTCFLLGVGCRLTPGLYDLGRTVLCLDFMIFTLRLL
HIFTVNKQLGPKIVIVSKMMKDVFFFLFFLGVWLVAYGVATEGLLRPRDRDLPNILRRVF
YRPYLQIFGQIPQEDMDVALMEHVNCSSELGAWARPPGGAHAGSCVSLYANWLVVLLLII
FLLVANILLLNLLIAMFSYTFGKVQGNSDLYWKAQRYSLIREFHSRPALAPPLIVISHVR
LLLRRLRRRRRALPASPVVEHFRVYLSKEAERRLLTWEAVHKENFLLAQARDKRDSDSER
LKRASQKVDMALKQLGQIREYERRLKGLEREVQHCTRVLDWVAEALSRSALLPPGGPPPP
SPPEPRD
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggtggctacggacaaggagcagagctggatccctaagattttcagaaagaagatctgc
acgacattcatagttgacctcgaagatcccggagggagcgtgtgccagtgcggccgcccg
cggagcgcccatccggccgtggctgtggaggatgccttcggggcagccgtggtgaccgcg
tgggacggggacgtgcacaccaccgagaagcccactgacgcctatggggacctggacttc
tcgggctcgggtcgcaggcccagcaatttcctccggctctctgaccgcacagatccagcg
acggtctatagtctggtcacgcgcacgtggggctttcgtgccccgaacctggtggtgtca
gtgctgggggggtcggggggccctgtcctccagacctggctgcaagacctgctgcggcgt
gggctggtgcgggccgcccagagcacaggggcctggatagtcacgggagggctgcacacg
ggcatcggacggcatgtaggtgtggctgtgagggaccaccagacggccagcaccgggggc
agcaaggtggtggccatgggggtggccccatggggcgtggtcaggaacagagacaccttg
gtcaaccccaagggctccttccccgcacggtaccgatggcgtggtgaccccgaggatggg
gtggagttcccgctggactacaactacgcggccttcttcctggtggacgatggcacccac
ggcaggctgggcggtgagaaccgcttccgcctgcgcttcgagtcctacgtggcgcagcag
aagacgggcgtgggggggactggaattgatatcccggtcctcctcctcctgatcgatggt
gatgaaaagatgctgaagcggatagaggatgccacccaggctcagctcccctgccttctg
gtggcaggctctgggggtgctgcagactgcttggcagagatcctagaagacactctggcc
cctggaagtggggtaaccaggagaggagaagcccgggatcggattaggcgtttcttcccc
aaaggggaccctgaggtcctgcaggcccaggtggaacggatcatgacccggaaggagttg
ctgacagtctattcatctgaggatggcgccgaggagtttgagaccattgtgttgagggcc
ctggtaaaagcctgcaggagctctgaggcctcggcttacctggatgagctgcggttggct
gtggcttggaaccgtgtggatattgcccagagtgaactcttccggggggacatccagtgg
cggtccttccacctggaggcttctctcatggacgccctgctgaatgacaggcctgagttt
gttcgcttgctcatctcccatggcctcagcctgggccacttcctgaccccgctgcgcctg
gcccagctgtacagcgcggtgccccccaactcactcatccgcagtcttctggaccaggct
tcccatggtgtgggtaccaaagccccaccaataaaagacagggtagaggagcctcggctt
cctaacgtggggcaagtgctgaggacacttctgggggagacatgtgcgccgagatatccg
gccagggacacccaggacccccacccaggccagggatacagggaaagcgagtgtctgctt
tcagactggaccaactcccagccctctctagactcggactttgtgcaggccccctggagc
gatctgttcctttgggctgtcctgctgaacagagcccagatggccttgtacttctgggag
aagggctccaactctgtggcctccgctcttggggcctgtttgctgctccgagtgatggcc
cgcctggaaccagaggctgaggaggcagcacggaggaaagacctggcaaccaagttcgag
ggcatgagtgttgacctcttcagtgagtgctaccacaacagtgagagacgggcggcccgc
ctgctcctccgtcgctgccccctctggggggatgccacctgcctccagcttgccatgcag
gctgatgcccgtgccttctttgcccaggatggggtgcagtctctgctgacacagaagtgg
tggggagagatggacagcaccacaccaatctgggccctggttctcaccttcttttgtcct
ccattcatttacaccaacctcatcaccttcaggaaatcagaagaggaacccctacagaag
gaccctgactttgacatggataggggtgttaatggggaagggccggctgggcccctgaac
cctcctgagaaggtgccccgcaggaggtcccagcagccaggttgctgcccccgacgtggg
tgtctgtgtcgctggtcctacttctggggggcgcctgtgacagccttcctgggcaacgtg
gtcagctacctgctgttcctgctgctgtttgcacgcgtcctcctcatcgacttccatcct
ggggcaccagggctgctggagctgctgctctacttctgggccttcacgctgctctgcgag
gagctgcgccagggcctggggggcggctggggcagcctggccagtgggggtcccgggcca
ggccaggcccccctgcgccaccgcctacatctctacctctctgatacctggaaccaatgt
gacctgctggcgctcacctgcttccttctgggtgtgggctgcagactgaccccgggcctg
tacgatctgggccgcactgtgctctgcctggacttcatgatcttcacactgcggctgctg
cacatcttcactgtcaacaagcagctgggacccaagatcgtcatcgtgagcaagatgatg
aaggatgtgttcttcttcctcttcttcctcggagtgtggctggttgcctacggggtggcc
acagaggggctcttgagaccccgggaccgagatctccccaacatcctgcgccgggtcttc
taccggccctacctgcagatctttgggcagatcccccaggaggacatggacgtggcgctc
atggagcacgtgaactgctcctcggagctcggggcctgggcgcgcccgccgggcggcgcg
cacgcgggctcctgcgtgtccctgtacgccaactggctggtggtgttgctgctcatcatc
ttcctgctcgtggccaacatcctgctgctcaacttgctcatcgccatgttcagctacact
tttggcaaagtccaaggaaatagcgacctctactggaaggcccagcgctacagccttatc
cgggaatttcactctcggcctgctctggccccgcccctcatcgtcatttcgcacgtgcgc
ctcctcctcaggagactgcgcaggcgccgtcgggccctgccagcctccccagtggtggag
cacttccgtgtctacttgtcgaaggaagcggagcgcaggctgctgacgtgggaagcagtg
cacaaggagaatttcctgctggcccaggccagagacaagcgagacagcgactctgagcgc
ctgaagcgcgcgtctcagaaggtggacatggcgctgaagcagctgggacagatccgggag
tacgaaaggcggctgaaagggctggagcgggaggtccaacactgcactcgcgttctggat
tgggtggctgaggccctgagccgctctgccttgcttcctccaggggggccgccacccccc
tctccacctgaacctagagactga
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