Planctomyces sp. SH-PL14: VT03_19840
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Entry
VT03_19840 CDS
T04354
Symbol
bepF_3
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pls
Planctomyces sp. SH-PL14
Pathway
pls01501
beta-Lactam resistance
pls01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pls00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VT03_19840 (bepF_3)
01503 Cationic antimicrobial peptide (CAMP) resistance
VT03_19840 (bepF_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pls03036
]
VT03_19840 (bepF_3)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pls02000
]
VT03_19840 (bepF_3)
01504 Antimicrobial resistance genes [BR:
pls01504
]
VT03_19840 (bepF_3)
Chromosome and associated proteins [BR:
pls03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VT03_19840 (bepF_3)
Transporters [BR:
pls02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VT03_19840 (bepF_3)
Antimicrobial resistance genes [BR:
pls01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VT03_19840 (bepF_3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
DUF4407
Motif
Other DBs
NCBI-ProteinID:
AMV20158
UniProt:
A0A142WZB6
LinkDB
All DBs
Position
complement(5127340..5128728)
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AA seq
462 aa
AA seq
DB search
MTFSQPVSPPRTATRLLALALAFAAPTLSGCQRTAAPTESTAAAGELPPIRVVPIRPARK
TLRRIVELPGRVEAYEVAPLHAKVTGYVESIPVDIGDSVAGPKGDGPTATPGAELCRLLV
PELREELAQKAALVGQAVAEVAQAEAAVKVAEAGLQSAHARVQEAEATVAREEATYKRWV
SEFERITQLVESGAVTRKVLEETKAQLDAAAAGRQEVTARIASVQALAREAVAGLEKARA
DLTATLSRQKVAEAEQRRLEAMVGYSVVRAPFDGVIVERNVHTGHLVRTGGGSGAGDRPL
LTIMKIDPVRVFVDVPEGDAVYVDAGTKATIKVPSLAGDPLAAPVTRTSWSLNATSRTLT
AEIDVANASKRLRPGLYVQVALTVAELEDVLSLPRTAIFTQDKRTCCYTIGADGKVVLTP
VTLGLQAGNELEVRSGLTGDEQVIGANTSAFRPGLPVEIGKP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacgttctcgcaacctgtttctccgcctcgaacggccacccgtctgctggccctcgcc
ctcgcctttgcggctccgacactctccggatgtcaaaggaccgcggcgcccacggaatcc
acggcggcggccggggagcttccccccattcgcgtggtgccgatccgccccgcgcggaag
acgctgcggcggatcgtcgagctccccggacgcgtcgaggcgtacgaggtcgctcccctc
cacgcgaaagtgaccggatacgtcgagtcgatcccggtcgacatcggcgattccgtcgcc
gggccgaaaggagacggaccgaccgcgacgcccggggcggagctgtgccggctgctcgtg
ccggagcttcgcgaagagctcgcccagaaggcggctctcgtcggccaggcggtggcggaa
gtcgcgcaagctgaggcggcggtcaaggtggccgaggcgggcctgcagtccgcccacgcc
cgtgtgcaggaggcggaagcaaccgtggcccgcgaggaggcgacctacaagcgatgggtg
tcagagtttgagcggatcacgcagctcgtcgagagcggggcggtcacccgcaaggtcctg
gaagagaccaaggcgcagctggatgcggcggccgcggggcggcaggaagtgaccgcccgc
atcgcctccgtgcaggcgctcgcccgcgaggcggtggcggggctcgagaaggcccgggcg
gacctgacggcgaccctttcccggcagaaggtggccgaggcggaacagcggcggctggag
gcgatggtcgggtactcggtggtccgggccccgttcgacggcgtgatcgtcgagcggaac
gttcacaccggccacctcgtgcgaacagggggcggaagcggcgcgggggaccggccgctg
ctgacgatcatgaagatcgatccggtgcgggtgttcgtcgacgttccggagggggacgcg
gtgtacgtcgacgccgggacgaaggcgacgatcaaggtcccctcgctggcgggcgatccg
ctggcggccccggtcacccggacgagctggtccctcaacgccacctcccggacgctgact
gccgagatcgacgtggcaaacgcgtcgaagcggctgcggcccgggctgtacgtgcaggtc
gcgctgaccgtggcggagctcgaagacgttctcagtctcccccggacggcgatcttcacg
caggacaagcggacctgctgctacacgatcggagcggacgggaaggtcgttctcacgccg
gttactctagggctgcaggcggggaacgagctggaggtccgaagcggcctgacgggggat
gagcaggtgatcggcgcgaacacgtccgcgttccggccggggctgccggtggagattggc
aagccgtag
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