Planococcus sp. MB-3u-03: CW734_10555
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Entry
CW734_10555 CDS
T05387
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
plx
Planococcus sp. MB-3u-03
Pathway
plx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CW734_10555 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plx03400
]
CW734_10555 (nth)
Enzymes [BR:
plx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CW734_10555 (nth)
DNA repair and recombination proteins [BR:
plx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CW734_10555 (nth)
Prokaryotic type
CW734_10555 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
TPR_AP5Z1
Motif
Other DBs
NCBI-ProteinID:
AUD13987
LinkDB
All DBs
Position
complement(1847310..1847951)
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AA seq
213 aa
AA seq
DB search
MDHMFPDAHCELIHRNPFDLVIAVLLSAQCTDKLVNKVTATLFEKYHTPEDYLSVPLEEL
QQDIRSIGLFRNKAKNIQALSRILIEQHGGRVPEDRDLLMTLPGVGRKTANVVVSVAFNK
PALAVDTHVERVSKRLGLCRWKDSPLQVEETIMKKTPAEDWSKTHHQIIFFGRYHCKAQN
PGCHVCPLFDRCREGKKRDKKGLVKHDAVTEIN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaccatatgtttcctgatgcccattgtgaattgatccaccgcaacccgttcgatttg
gtcattgcggtattattgtctgcacaatgcaccgacaagcttgtcaacaaagtgacggca
actcttttcgagaagtaccatacaccggaagattatctttcggttcctttggaagaattg
caacaggatatccgttcgattggcttgttccgcaataaagcgaagaacatccaggcgctt
agccgcatactgatcgagcagcacggcgggcgtgtgccggaagaccgcgatctattgatg
accttgccaggcgtcggaagaaagaccgccaatgtggtcgtttccgtggcattcaataaa
ccggcactggccgtcgatacccatgtcgaacgcgtctcgaaacgtcttggcttatgccgc
tggaaagattcgcccttgcaagtcgaagagacgatcatgaaaaaaacgcctgctgaggat
tggtcgaaaacccatcaccaaatcattttcttcggccgctaccactgcaaggcgcaaaat
cccggctgtcacgtgtgcccgttgttcgaccgctgccgggaaggaaagaaacgcgataaa
aaagggcttgtgaaacatgacgctgtcacggaaatcaattga
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