Paenibacillus lycopersici: GXP70_18655
Help
Entry
GXP70_18655 CDS
T07013
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GXP70_18655 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_18655 (nth)
Enzymes [BR:
plyc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GXP70_18655 (nth)
DNA repair and recombination proteins [BR:
plyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GXP70_18655 (nth)
Prokaryotic type
GXP70_18655 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QHT63995
UniProt:
A0A6C0G899
LinkDB
All DBs
Position
complement(4231723..4232373)
Genome browser
AA seq
216 aa
AA seq
DB search
MTHVLDVIGGMFPDAHCELHHSNPFELTIAVLLSAQCTDETVNKVTLHLFQKYRTPADYL
AVPLDELENDIKRIGLYRNKALFIQKLCRMLIDDYGGDVPREHAELTKLPGVGRKTANVV
VSNAFGVPAIAVDTHVERVSKRLGFAKPDDSVLEVEHKLMKLVPRELWTETHHRLIFFGR
YHCKAQNPQCPVCPLLDICKEGKKRMKPAPNRKAKS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgtgctggacgtcatcggcggcatgtttccggatgcgcattgcgagctccat
cacagcaaccctttcgagctcaccatcgccgtcttgctttctgcgcagtgcaccgacgaa
accgtgaataaagtcacgcttcatttgtttcaaaaataccgaacgcctgccgattatttg
gccgtcccgctggacgagcttgaaaatgacataaagcggatcggactatatcgcaacaaa
gcgttatttatccagaagctgtgccgcatgctgatcgacgattacggcggcgacgtcccg
cgcgagcatgcggagctgacgaagctgcccggcgtaggacgcaagacggccaatgtcgtc
gtatccaatgcgttcggcgtaccggccatcgcggtcgacacccatgtcgagcgcgtatcc
aagcggctcggcttcgcgaaaccggacgacagcgtgctggaggtcgagcataagctgatg
aagctcgttccccgggaattatggacggagacgcaccataggctgatcttcttcggacgg
tatcattgcaaggcgcagaatccgcaatgtcccgtttgcccgctgctcgacatttgcaaa
gaaggcaagaaacgtatgaaacccgctccaaaccgaaaagctaagagctag
DBGET
integrated database retrieval system
