Paenibacillus lycopersici: GXP70_25545
Help
Entry
GXP70_25545 CDS
T07013
Name
(GenBank) response regulator transcription factor
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc01502
Vancomycin resistance
plyc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GXP70_25545
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GXP70_25545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plyc02022
]
GXP70_25545
01504 Antimicrobial resistance genes [BR:
plyc01504
]
GXP70_25545
Two-component system [BR:
plyc02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
GXP70_25545
Antimicrobial resistance genes [BR:
plyc01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
GXP70_25545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
QHT62997
UniProt:
A0A6C0G2F8
LinkDB
All DBs
Position
complement(5818856..5819554)
Genome browser
AA seq
232 aa
AA seq
DB search
MTAHGKTILLVDDEPEILELLRIYLRNEGFALLVAHNGKEALALLARERIDLIVMDVMMP
EMDGMESCLRIRETSDIPIIFLSARGQELDKIHGLTIGADDYVTKPFSPLELVARIKSHL
RRYGRHNAGPMNQDEIVVDNLVINGSTHVVTVDERQVKLTPREFAILELLARNRGIVFSM
EHIYERIWKASAIDSNNTVMVHVRKIREKTEQNPRQPKYIQTVWGVGYKIEN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcatggcaagacgattctgctcgtcgacgacgagccggaaattttggagctg
ctgcgcatttatttgaggaatgaaggctttgcgctgctcgtggcccataacggcaaggaa
gcgctggcgctgctagcccgggaacgcatcgatctgatcgtcatggacgtgatgatgccg
gagatggatggcatggagagctgtctgagaatcagggaaaccagcgacatcccgattatt
ttcctgtccgcgcggggacaggagctggataagattcacggactgacgatcggcgccgac
gattacgtcacgaagcctttcagtccgctcgagctggtggcccgcatcaagtcgcatctg
agacgttacgggagacataacgccggaccgatgaatcaggacgagatcgtcgtggataac
ctggtcatcaacggttcgacccacgtcgtcacggtggacgagcggcaagtgaagcttacg
ccgcgggaattcgcgattctcgagctgctggcgcggaatcgggggatcgtgttcagcatg
gagcatatttacgagcggatatggaaagcgagcgcgatcgattccaacaatacggtgatg
gtccatgtccgcaaaatccgcgagaaaaccgagcaaaacccgcgtcagccgaaatacatc
cagacggtctggggcgtcgggtacaaaatcgaaaactaa
DBGET
integrated database retrieval system
