KEGG   Paenibacillus lycopersici: GXP70_26875
Entry
GXP70_26875       CDS       T07013                                 
Symbol
cas5c
Name
(GenBank) type I-C CRISPR-associated protein Cas5
  KO
K19119  CRISPR-associated protein Cas5d
Organism
plyc  Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:plyc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:plyc02048]
    GXP70_26875 (cas5c)
Prokaryotic defense system [BR:plyc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    GXP70_26875 (cas5c)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: QHT63228
UniProt: A0A6C0G1A6
LinkDB
Position
complement(6146210..6146929)
AA seq 239 aa
MRNAIEFEVYGNYALFTDPLTKLGGEKLSYQVPTYQALKGIVEAIYWKPTLTIYVDEVRV
MNAIRMESKGIRPMEYGGGNTLANYTYLRDVRYQVRAHFEFNMNRPDMAYDRNEHKHHNV
LRRSLKIGGRRDIFLGARECQAYVEPCVFGEGEGFYDSYGAIHLGSMVHGLSYPDETGRN
QLEARLWNPVMKDGCIQFIRPEQCTQVRVIAEMVAKHFDPLQIESADDLLAQLEEGGNP
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaggaatgcaatcgaatttgaagtttatggaaattacgccctattcacggaccctttg
actaaacttggtggagagaagttatcgtaccaggtaccgacctatcaagctttgaaggga
atcgtggaggctatctactggaagccgactttgacgatttatgtcgatgaggtgcgcgtt
atgaatgcgatacgcatggaatccaaaggcatacgtccaatggagtatggcggtggcaat
accttggcgaactatacgtatttacgagatgttcgctaccaagtccgcgctcatttcgag
tttaatatgaaccggccggacatggcgtatgaccgcaatgagcacaaacatcataatgtt
ctgcgccggtcgctcaagataggagggcgcagagatattttccttggcgctcgggaatgt
caggcatatgtggaaccctgcgtcttcggagaaggtgaaggattttatgatagctacgga
gctatccacctgggctcgatggtgcatggtctgagttacccggatgagaccggcagaaac
caacttgaagcaaggttatggaatccggtcatgaaagacggttgcattcaatttattaga
ccagaacaatgtacgcaggtacgtgtcattgccgaaatggtggcgaaacatttcgatcca
ttgcagatcgaatcggcggatgacttgcttgcacaattggaagagggggggaatccatga

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