Paenibacillus sp. lzh-N1: C0638_10710 Help Entry C0638_10710       CDS       T10344                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism plzh  Paenibacillus sp. lzh-N1 Pathway plzh03030   DNA replication plzh03410   Base excision repair plzh03420   Nucleotide excision repair plzh03430   Mismatch repair Brite KEGG Orthology (KO) [BR:plzh00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C0638_10710    03410 Base excision repair     C0638_10710    03420 Nucleotide excision repair     C0638_10710    03430 Mismatch repair     C0638_10710  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:plzh03032]     C0638_10710    03400 DNA repair and recombination proteins [BR:plzh03400]     C0638_10710 Enzymes [BR:plzh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C0638_10710 DNA replication proteins [BR:plzh03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C0638_10710 DNA repair and recombination proteins [BR:plzh03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C0638_10710    NER (nucleotide excision repair)     GGR (global genome repair) factors      C0638_10710    MMR (mismatch excision repair)     DNA ligase      C0638_10710   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C0638_10710 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia HHH PTCB-BRCT DNA_ligase_ZBD DUF669 Motif Other DBs NCBI-ProteinID:  AUO06987 LinkDB All DBs Position 2375386..2377401 Genome browser AA seq 671 aa AA seqDB search MNPMHRMEQLVAELNTYNYHYYTLDDPQISDKEYDVLYDELVALEQTSGLVLPDSPTQRV GGEILKGFTPHRHLAPLWSLDKAQNMEQLRAWNARVVKLVNDYNTKNPEQPLPSPGYAIE LKFDGLTLNLTYTDGQLVQASTRGNGVVGEGILAQVKTIKSVPLKIPFQNGTIEVQGEGI MNLSVLSNYNEKAVEPLKNARNAAAGALRNLNPKVTAERRLNAFFYNVGYADRIQFNSHQ EMMTFLRENHFKVNPYLTYFDNFDDVMEQLIEIEESRAGLDYLIDGAVLKITDMRTREVL GYTDKFPRWAVAYKFEAEETTTVLNSVEWNVGRTGKITPLARVEPVELAGVTVQNCTLNN AGDIERKNLKFALGARVFIRRSNDVIPEILGKVTSENDGEEIVVPEHCPACGFPLQQRGA HLFCDNKLGCKPQIVARISHFASRDAMDIETFSDKTAIQLHDELGVREPADLYTLQYDDL VKLERFGEKKANNLLVALEKSKERDLASFLYALGIPNTGKATTRMLAEHYRDLHKTMSAT VDELIELPDVGGIVAESIVAFFADPFTQAGIEKMLSLGVKAQAPEAPQVKKTDSFFSGKT VVLTGTLHQLTRDEAASRLEALGAKVAGSVSKKTDLVIAGEKAGSKLAKAQQLGIDTIED EDEFIRLLEQE NT seq 2016 nt NT seq  +upstreamnt  +downstreamnt atgaacccaatgcacaggatggagcagcttgttgctgaactgaacacatataactatcac tactatacattggatgacccccagatcagcgacaaagaatatgatgtgctttatgacgaa ctggtagcgcttgaacaaacaagcggtcttgttctgccagattcgccaacacagcgtgtg ggcggggagatactcaagggcttcacaccgcatcgccacctcgctccattatggagcctt gataaagctcagaatatggagcagctgcgtgcatggaacgcgcgtgtcgtgaagctggtc aatgattacaataccaagaacccggagcaacccttgccatctccaggctatgcgatagaa ctaaaatttgatggactgacgctgaacctgacgtacacggatggacaactggtgcaggct tctacccgtggtaatggtgtggtaggtgaggggatactggcacaggtaaagacgattaaa tccgtgccacttaaaattccttttcaaaatggaactattgaggtgcagggagaagggatc atgaatctctccgtactgtccaattataatgagaaggccgtagagcctcttaaaaatgca cgaaatgccgcagcaggggctttgcgtaacttgaatcccaaagtaacagcagagcggcgt ttgaatgcatttttctataatgtaggctatgcggaccgtattcagtttaacagccaccag gagatgatgaccttcctgcgtgaaaatcatttcaaggtaaacccatacctaacttacttt gataattttgatgatgtaatggagcagttaattgagattgaagaatcccgtgccggtttg gattatcttattgatggggcagtattgaaaattacagatatgcgcacacgtgaggttctc ggatataccgataaattcccacgctgggcggtggcatataagttcgaagcagaggaaacg actacggtgcttaactcggtcgagtggaatgtaggaagaaccgggaagatcactccactg gctagggtagaaccggtagagctggcgggagtcactgtacaaaattgtacgctgaacaat gctggtgatatcgagcgtaagaacctgaagtttgccttgggggcgcgtgtgtttattcgt cgctcaaacgatgttattcctgagattttgggaaaagtaacatctgagaacgatggggag gaaattgttgttccagagcattgtccagcttgtggatttccgttgcagcagcgaggcgcc catttattttgtgacaataagctaggttgtaaaccacaaattgtggcccgcatttcccat tttgcatcacgtgatgccatggacattgagacgttcagtgacaaaacagctatccaactg catgatgaattgggagttcgtgaacctgcggatctgtatacactgcaatatgatgatctt gtgaagctggagcggtttggtgagaaaaaggccaataacctcttggtggcacttgaaaag agtaaggagagagatttggcctctttcctttatgctctgggcataccgaataccggtaaa gcgacgacacgcatgctggctgaacactatcgtgatttgcacaagacgatgtccgctacg gtggatgaactgatagaactgccggatgtaggtgggattgtagctgaaagcattgttgca ttctttgccgatccatttactcaagcagggattgaaaagatgctgtctctaggagtaaaa gctcaggcccccgaagctccacaggtgaaaaagacagacagctttttcagtgggaaaacg gttgtgcttacaggtaccttgcatcagcttacgcgtgatgaagctgcatcaaggttggag gcgctgggagccaaagttgccggatctgtatcgaaaaagacggatctagtcatagctggt gaaaaggctgggagcaagctggctaaggcacaacagctcggaatcgacaccatagaagat gaggatgaattcatcagactgttagaacaagaataa

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