Pseudomonas marginalis: U0037_04745
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Entry
U0037_04745 CDS
T10241
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00300
Lysine biosynthesis
pmab00550
Peptidoglycan biosynthesis
pmab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U0037_04745
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U0037_04745
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmab01011
]
U0037_04745
Enzymes [BR:
pmab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
U0037_04745
Peptidoglycan biosynthesis and degradation proteins [BR:
pmab01011
]
Precursor biosynthesis
Amino acid ligase
U0037_04745
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
WQD73266
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Position
1045196..1046659
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELTLDSRNVRAGDLFLAVPGGKYDGRAHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAKQLSDIAGRFYGDPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGAGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVMTNLSRDHLDYHGTMEAYAAAKAKLFAWNDLKCRVVNLDDAFGRQ
LAAEDSEARLISYSLEDSSAYLFCREAQFNDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAIGALLGLDYALDEILRVLPKLEGPAGRMQRLGGGKQPLVVVDYAHTPDALEKVLEAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSEDPSQIFDDIRAGF
NDVSKAAFVAGRGAAIAQLIASASADDVVVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagcctgaacaagatttttgcccacgccggtcgtgatctgttgattcgcgag
ttgacgctggacagccgtaatgtacgcgccggtgacctgttcctggcggtgccgggcggt
aagtacgatggccgtgcgcatatcgccgatgcgttgcagcgcggtgctgcggcagtggct
tatgaagtggaaggcgccaccgtgctgccgatcaccgatgtgccgttgattccggtcaaa
gggttggcaaaacagttgtcggatattgccggtcgcttctatggcgacccgagccgtcac
ctcaacctggtgggcgtcaccggcaccaacggcaagaccagcgtgacccagctggtcgcg
caagcgcttgacctgttggggcagcactgcggcatcgtcggcaccttgggcgccggcttt
tatggcgcgctgcaaagcggcctgcacaccacgccgaacccgatcgccgtgcaagcgacc
ctggccgacctgaaaaaggccggtgccaaggcggtcgccatggaagtttcttcccacggc
ctggatcagggccgcgtcaccgccctggcttttgacgtggcggtgatgaccaacttgtcc
cgcgatcacctggactaccacggcaccatggaggcttacgccgccgccaaggccaagctg
tttgcctggaatgacctgaagtgccgggtggtcaacctggatgacgcattcggccgccaa
ctggccgccgaagacagcgaagcgcgcctgatcagctacagcctggaagattccagcgcg
tacctgttctgccgcgaagcccaatttaatgacgaaggcgtgcgcgccacgttggtcacg
cctcagggcgaacaccacctgcgcagcacattgctcgggcgcttcaacctgagcaacgtc
ctcgccgccatcggtgcgctgctcggcctggattacgccctggatgaaatcctgcgcgtg
ctgcccaagcttgagggcccggccggtcgcatgcagcgcctcggtggcggcaagcagccg
ctggtggtggtcgattacgcccacacccccgacgccctggaaaaagtcctggaagccctg
cgcccacacgccaagggcaaattgctgtgcctgttcggttgtggcggtgatcgcgatcgc
ggcaagcgtccgttgatggccgagatcgtcgagcgcttggccgatggcgtgctcgtcacc
gacgacaacccgcgcagcgaagacccgagccagattttcgacgacatccgcgcgggcttc
aacgacgtgtccaaggccgctttcgtcgccggtcgcggtgcggccatcgcccaattgatc
gccagcgccagcgctgacgatgtggtggtactggccggtaaaggtcacgaggactatcag
gaaatcaacggcgaacgccatgccttctccgatctggtcgaggccgatcacgccttgacg
gcctgggaggtcgcccatgcttaa
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