KEGG   Pseudomonas marginalis: U0037_04745
Entry
U0037_04745       CDS       T10241                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
pmab  Pseudomonas marginalis
Pathway
pmab00300  Lysine biosynthesis
pmab00550  Peptidoglycan biosynthesis
pmab01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    U0037_04745
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    U0037_04745
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmab01011]
    U0037_04745
Enzymes [BR:pmab01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     U0037_04745
Peptidoglycan biosynthesis and degradation proteins [BR:pmab01011]
 Precursor biosynthesis
  Amino acid ligase
   U0037_04745
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase ADH_zinc_N
Other DBs
NCBI-ProteinID: WQD73266
LinkDB
Position
1045196..1046659
AA seq 487 aa
MSLSLNKIFAHAGRDLLIRELTLDSRNVRAGDLFLAVPGGKYDGRAHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAKQLSDIAGRFYGDPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGAGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVMTNLSRDHLDYHGTMEAYAAAKAKLFAWNDLKCRVVNLDDAFGRQ
LAAEDSEARLISYSLEDSSAYLFCREAQFNDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAIGALLGLDYALDEILRVLPKLEGPAGRMQRLGGGKQPLVVVDYAHTPDALEKVLEAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSEDPSQIFDDIRAGF
NDVSKAAFVAGRGAAIAQLIASASADDVVVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgtctcttagcctgaacaagatttttgcccacgccggtcgtgatctgttgattcgcgag
ttgacgctggacagccgtaatgtacgcgccggtgacctgttcctggcggtgccgggcggt
aagtacgatggccgtgcgcatatcgccgatgcgttgcagcgcggtgctgcggcagtggct
tatgaagtggaaggcgccaccgtgctgccgatcaccgatgtgccgttgattccggtcaaa
gggttggcaaaacagttgtcggatattgccggtcgcttctatggcgacccgagccgtcac
ctcaacctggtgggcgtcaccggcaccaacggcaagaccagcgtgacccagctggtcgcg
caagcgcttgacctgttggggcagcactgcggcatcgtcggcaccttgggcgccggcttt
tatggcgcgctgcaaagcggcctgcacaccacgccgaacccgatcgccgtgcaagcgacc
ctggccgacctgaaaaaggccggtgccaaggcggtcgccatggaagtttcttcccacggc
ctggatcagggccgcgtcaccgccctggcttttgacgtggcggtgatgaccaacttgtcc
cgcgatcacctggactaccacggcaccatggaggcttacgccgccgccaaggccaagctg
tttgcctggaatgacctgaagtgccgggtggtcaacctggatgacgcattcggccgccaa
ctggccgccgaagacagcgaagcgcgcctgatcagctacagcctggaagattccagcgcg
tacctgttctgccgcgaagcccaatttaatgacgaaggcgtgcgcgccacgttggtcacg
cctcagggcgaacaccacctgcgcagcacattgctcgggcgcttcaacctgagcaacgtc
ctcgccgccatcggtgcgctgctcggcctggattacgccctggatgaaatcctgcgcgtg
ctgcccaagcttgagggcccggccggtcgcatgcagcgcctcggtggcggcaagcagccg
ctggtggtggtcgattacgcccacacccccgacgccctggaaaaagtcctggaagccctg
cgcccacacgccaagggcaaattgctgtgcctgttcggttgtggcggtgatcgcgatcgc
ggcaagcgtccgttgatggccgagatcgtcgagcgcttggccgatggcgtgctcgtcacc
gacgacaacccgcgcagcgaagacccgagccagattttcgacgacatccgcgcgggcttc
aacgacgtgtccaaggccgctttcgtcgccggtcgcggtgcggccatcgcccaattgatc
gccagcgccagcgctgacgatgtggtggtactggccggtaaaggtcacgaggactatcag
gaaatcaacggcgaacgccatgccttctccgatctggtcgaggccgatcacgccttgacg
gcctgggaggtcgcccatgcttaa

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