Pseudomonas marginalis: U0037_11255
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Entry
U0037_11255 CDS
T10241
Symbol
metC
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00270
Cysteine and methionine metabolism
pmab00450
Selenocompound metabolism
pmab01100
Metabolic pathways
pmab01110
Biosynthesis of secondary metabolites
pmab01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
U0037_11255 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
U0037_11255 (metC)
Enzymes [BR:
pmab01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
U0037_11255 (metC)
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Rhodanese
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WQD74500
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All DBs
Position
2427846..2430602
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AA seq
918 aa
AA seq
DB search
MSQTVTPGQLQQWLFDGQEIALFDVREHGQYGEAHLFFGVNLPYSRLELEVWRLAPNPKV
RLVIYDQNGGDIAARSAERLQALGYEHVHVLEGGADGWQAAGLQLFAGVHVPSKAFGELV
EETSHTPHVTAQQLAEWQARGEPLVVLDGRPFDEYRKMTIPGSVCCPNGELGYRLQDLVP
DDHTPVVVNCAGRTRSIIGAQTLINLGVKNPVYALENGTQGWYLEDFQLEHGSTRRYADD
VSSKALAQQRLAAQKLAEQAGAKTVLAAQVEQWAADVTRSLFLCDVRTAEEFAAGSLPGA
QHTPGGQLIQSTDLYIGVRQARLVLIDSDGVRAPIVASWLRQLGHEAYVLAGGVSSGLAL
PAYQAPAYQALPVISAKSLSDALKDDTLVVIDLRPSMSYRKAHIAGSRWSIRSLLASDVA
GDQRPLVLLADDPRLAAFAAQVLPDTQRAHARLLEGGLDAWRAAGFAVQEDANTPPDHQC
IDFLFFTHDRHSGNKDAARQYLAWEIGLLAQMSANEIASLKPLRVQPQATLDARVRTRLV
HAARTEKGQGGRGVNVPVSRLSTVIFDNLTQMRDARARRDTERVLSYGARGNPTAFALED
MVTELEGGYRTRLFGTGLAAVAQTFLAYLRPGDHVLITDAVYAPVRRLARDLLEPFGIQV
NYFAPDGSDLQAQLQANTKMVYTEVPGSLLYELGDLPAIAALCKPRDILLAVDNTWGSGY
LYRPLALGADISIMALTKYLCGHSDVVMGSVCTRQDVWQPLASMSDTVGIAVSPDDAYLV
LRGARTLAARMEVHERQALDIAHWLQAQPQVKRVFHPALPDHPNHALWRRDFAGSNGLLS
FELRNDEVTGVERFIDALQVFGLGASWGGYESLVTVADPSDRNSVSDRQLNPVLRLHIGL
EDVGALIEDLQRGFAALG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccgtaaccccagggcaattgcagcagtggctgttcgacgggcaggaaatt
gccctttttgatgtgcgcgagcacggacagtatggcgaagcccatctgttcttcggggta
aacctgccctatagccgactggagctggaggtctggcgtctggcgccgaacccaaaggtt
cgtttggtgatttacgatcagaacggtggagatatcgcggcacgctccgccgagcgcctg
caagcgttgggctacgagcacgtacacgttctcgagggcggtgccgatggctggcaggcc
gctggtttgcaactgtttgccggggtgcatgtgccgtccaaggcctttggcgagttggtg
gaagaaaccagccacacgccgcatgtgacggcgcaacaactggccgaatggcaggcccgg
ggagagccgttggtggtgctggacggcaggccgttcgatgaataccgcaagatgaccatt
cccggttcagtctgctgcccgaacggcgaactgggctatcgcctgcaggatctggtgccg
gacgaccacacgcctgtcgtggtcaattgcgcagggcgaacccgcagcattattggcgcc
cagaccttgatcaatctgggagtgaagaacccggtctacgccctggaaaacggcacgcaa
ggctggtatctggaagacttccagctggagcatggcagcacccgtcgctatgccgatgac
gtgtcatcgaaagccttggcacaacagcgtcttgccgcgcaaaagctggccgaacaggct
ggggcaaaaaccgtactggccgcgcaggtcgagcagtgggccgcggatgttacgcgcagc
ctgttcctatgcgatgtgcgtacagccgaagaatttgccgccggcagcctgcctggtgcg
caacatacaccgggtggccagttgattcagtcaaccgatctgtatatcggcgtgcgacag
gcacggctggtgttgatcgacagcgatggcgttcgcgcaccgattgttgccagttggctt
cggcagctggggcatgaggcctatgtgctggcagggggggtgagcagtggcttggcgttg
cccgcgtatcaggcacctgcataccaagcgttgcccgtgatatcggcgaagtccctgagc
gatgctctcaaggacgatacgctggtagtcattgatctgcgtccgagcatgagctatcgc
aaagcccacattgccggttcacgctggtcgatccgttcgttgctggcaagcgatgtggct
ggcgatcagcgaccattggtgttgctggccgatgacccgcgcctcgccgctttcgcagcg
caggtgttgccggacactcagcgcgcacatgctcgcttgttggagggtggtctcgacgcc
tggcgtgcggcggggttcgccgtgcaagaggacgccaacacaccgcctgatcatcagtgt
atcgattttctgttctttacccatgatcgccactctggcaacaaggacgccgcgcgccag
tacctggcgtgggaaataggcctgttggcgcagatgagcgcaaacgaaatcgccagcctc
aagccgctgcgcgtgcagcctcaagccaccctcgatgcacgggtccgtacgcgcctggta
catgcagcgaggacggaaaagggccagggcgggcggggcgtcaacgttccggtcagccgg
ttgagtacggtgattttcgacaacttgacgcaaatgcgcgacgcccgtgctcgccgtgat
accgagcgcgttctgagttatggcgcccggggcaacccgacggcgtttgccctggaagat
atggtgacggagctggagggcggttaccgtacccgcctgttcggtaccgggctggcggcg
gtggcacagacgttccttgcgtacctgcggcccggcgaccatgtgctgatcaccgacgcg
gtatacgctcccgtgcggcgtctggcacgggacctgcttgagccgttcggaatccaggtc
aattacttcgcgcctgacggcagcgacttgcaggcgcaactgcaagccaacacgaaaatg
gtctacaccgaagtacccggttcattgctgtatgaactcggcgacttgccggccatcgcg
gcgctgtgtaaaccacgggacatcctgttagccgtggacaacacctggggctcgggctat
ctgtatcgaccactggcactgggcgcggacatctcaatcatggcgttgaccaagtacctg
tgcggtcacagtgatgtggtcatgggcagcgtctgcacccggcaagacgtctggcagcca
ctggcatccatgagcgataccgttggcattgccgtcagtcccgacgacgcctatctggtg
ctgcgcggcgcacgtaccctggcggcacgcatggaggtgcacgaacgccaggccctggat
atcgctcactggctgcaagcacagccgcaggtgaaacgggtcttccacccggcgttgccc
gatcatcccaatcacgcactgtggcggcgggacttcgctggcagcaacggattgctgtcc
ttcgaactgcgaaatgatgaggtcaccggcgtcgagcgcttcatcgatgcgctgcaggta
ttcggtctgggggcttcctggggaggctacgaaagcctcgttacggttgctgacccatcg
gatcgcaatagcgtctcggatcgccaattgaatccggtcttgcggttacacattggactc
gaggatgtcggggcgttgattgaggatctgcaaaggggatttgccgctctggggtaa
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