Papilio machaon (common yellow swallowtail): 106718925
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Entry
106718925 CDS
T05138
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106718925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106718925
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106718925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
106718925
NCBI-ProteinID:
XP_014368616
UniProt:
A0A194QV33
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MSIEYALVSEGEEDEPIELPTEEDGSLLLSTVTAQFAGASGLKYRVGGRLRGLRLVEERV
SPPPGGWAAHRYFCAFPRASAPPSRPRCSDLIVLGLPWKTGEDAVREYFSSFGELLMVQV
KRDAKTGLSKGFGFIKFAEYEAQVRALGRRHMIDGRWCDVRIPNSKDGGAAAHRKVFVGR
CTESLTAEDLREYFGAFGQVTDVFVPRPFRAFSFVTFLDPEVAQSLCGQDHIIKGVSVNI
STASPKRDRGSRSQLLGWGLMEGSATRVYSWPPEAWPAHPQHAPPAPSAPAAPVSPARDA
KPYLKYH
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatagagtacgctttggttagcgagggcgaagaagacgagcccatagagttgcca
acagaagaagatggctccttacttttgagcacagtcacagctcaattcgcgggagcgagt
ggtcttaaataccgggttggtggtcggctccggggcttgcgtctcgtagaggagagggtg
tcgcccccgcctgggggctgggcggcacatcgctatttctgcgcattccctcgggccagc
gccccaccatcgcgtcctcgttgctcggatctaatagtgctgggcttgccgtggaagacc
ggtgaggatgcagttcgtgaatatttttcttcatttggtgagttactaatggtacaggtg
aagcgagacgctaaaacgggtttatctaaaggttttggattcataaagtttgctgaatat
gaagcacaagtgcgtgccctgggtcggcggcacatgatcgatggtcgctggtgtgacgtg
cgtattcccaacagcaaagatggtggcgctgccgcacaccgcaaggtattcgtcggcaga
tgtaccgagagcctcactgcggaagatttacgcgagtattttggtgccttcggtcaagtg
acagatgtgtttgtgccccgtccttttcgcgcttttagctttgttacatttctggaccca
gaagtagcccagtctctgtgcgggcaggaccatattatcaaaggtgtgtcggtgaatatt
tcaactgcttctcctaagagagacagaggctctcgttcacagttgctcgggtggggtctc
atggaaggcagtgcgacacgcgtatatagctggccgccagaagcgtggccggcgcaccca
cagcatgcgccacccgcaccttccgcgcccgccgcacctgtttcgcctgctcgggatgcc
aagccctacctcaagtaccactga
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