Paraphotobacterium marinum: CF386_00685
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Entry
CF386_00685 CDS
T05093
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pmai
Paraphotobacterium marinum
Pathway
pmai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CF386_00685 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmai03400
]
CF386_00685 (nth)
Enzymes [BR:
pmai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CF386_00685 (nth)
DNA repair and recombination proteins [BR:
pmai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CF386_00685 (nth)
Prokaryotic type
CF386_00685 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF3173
IMS_HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ASK77705
UniProt:
A0A220VBH8
LinkDB
All DBs
Position
large:126425..127057
Genome browser
AA seq
210 aa
AA seq
DB search
MNNNKRVQIFERFKQNNPKPETELNWTSPFELLIAVILSAQATDVSVNKATDKLFPIANT
PDAIKNMGLATLKTYIKTIGLFNSKAENIIKTCKILLIKHDGKVPDNRDDLEKLPGVGRK
TANVVLNTAFNQPTIAVDTHIFRVSNRTKLASGDTVIKVEEKLLKVVPTKFKYDIHHWLI
LHGRYVCTARKPNCENCLIHDLCEFNEKVY
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
ttgaataacaataaaagagttcaaatatttgagcgattcaagcaaaataacccaaaacct
gaaactgagcttaactggacatcccctttcgaattattgatagctgtaattttatctgct
caagctactgatgtttctgtaaacaaagcgaccgataagctttttccaattgcaaacaca
cctgatgcaatcaaaaatatgggattagccacgttaaaaacctatataaaaacaataggt
ttatttaattctaaagctgaaaatataattaaaacttgcaaaatattactaataaagcat
gatggcaaagtgcctgataatcgtgacgatcttgaaaagcttcctggcgtgggaagaaaa
acagcaaatgtggttttaaatacagcctttaatcaaccgaccattgcagttgatacgcac
atctttagagtaagtaatagaacaaagttagcatcgggcgatacggtcattaaggtagaa
gaaaaactattgaaagttgttcctacgaaatttaaatatgatattcatcattggcttatt
cttcatggacgctacgtttgtaccgcaagaaaaccgaattgtgaaaattgtttaatacat
gatttgtgtgaatttaatgaaaaagtatattag
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