Parus major (Great Tit): 107198250
Help
Entry
107198250 CDS
T04864
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X3
KO
K10357
myosin V
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107198250 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107198250 (MYO5B)
04131 Membrane trafficking [BR:
pmaj04131
]
107198250 (MYO5B)
03029 Mitochondrial biogenesis [BR:
pmaj03029
]
107198250 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmaj04812
]
107198250 (MYO5B)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107198250 (MYO5B)
mRNA cycle factors
P-body specific factors
107198250 (MYO5B)
Membrane trafficking [BR:
pmaj04131
]
Others
Actin-binding proteins
Myosins
107198250 (MYO5B)
Mitochondrial biogenesis [BR:
pmaj03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107198250 (MYO5B)
Cytoskeleton proteins [BR:
pmaj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107198250 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
107198250
NCBI-ProteinID:
XP_015470588
Ensembl:
ENSPMJG00000002662
LinkDB
All DBs
Position
Z:243782..386470
Genome browser
AA seq
1825 aa
AA seq
DB search
MSAAQLYTKYTRVWIPDPDEVWRSAEIVKDYKEGDKSLQLKLEDETLYEYPIDLQGNELP
FLRNPDILVGQNDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSASETNIEAKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASSSLPEFKDLGLTCAEDFFYTSQGGDTSIDGVD
DADDFEKTRHAFTLLGVKESHQMTIFRIIAAILHLGNLEIQGERDGEACSVSSEDEHLNN
FCSLLGVEHSQMQHWLCHRKLVTTAETYVKSMSLHQVVNARNALAKHIYAQLFNWIVQHI
NKALQTTVKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EGIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHAASQHFQK
PRMSNTSFIILHFADKVEYQSEGFLEKNRDTVYEEQISILKASKYQMVADLFQEETEAVP
ATAVRKGTPRISVRSARPAFKAANKEHRKTVGHQFRNSLHLLMETLNATTPHYVRCIKPN
DEKLPFKFDPKRAVQQLRACGVLETIRISAAGFPSRWSYPDFFNRYRVLMDKRDLCKNDK
EQICQTLLEDLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIIIQKTVRGWLQR
AKYQRLRRATLTLQCYARRHLARRLFEHLRRTRAAIILQKQYRMLRMRQAFLRVRNATLT
IQAFARGMFVRRIYHQMLVEHKATILQKYARGWLARMQFRRARAAAVVLQCHWRRLKARR
QLKALRIEARSAQHLKKLNIGMENKVVQLQRKVDEQNKENKLLNEQLSMLTSAHSSEVEK
LKKELQQYQQTQQGDGNQLLSLQEEMEQLRMELERAHGEREVMEDSHGKERDLLRKRISD
LEEENTLLKQEKEELNRRILCQSEDEFARNTAEENIQMKKELEEERSRYQNLVKEYASLE
QRYDNLRDEMTIIKQTPGHRRNPSNQSSLESDSNNPSICMSEIGDTEDVIQQVEEIGMEK
AAMDMTLFLKLQKRVRELELERRKLQAQLEKKEQEIKKSQVIETKTEVSSEHEDFAYNSL
KRQELESENKKLKNELNELRKAIADYATQNNSSNDVQDSYNLLLNQLKSANEELEVRKEE
VLILRSQIMKAAQQKETGKDMVKERENISPDASWPNSDRHVDQEDAIEAYQGMCETNRLL
EAQLQDQRREHEEEMEALRNQVDLMQEELEKQQQAFLQTLQLSPEVQVELGLQQEITRLT
NENLDLKELLEKLEKNEKKLKKQLKIYMKKVQDFEASQTMVPVERRSHERNMQVAVQRKE
KDFQGMLEYYKEDEPLLIRNLITDLKPQAVSATVPCLPAYILYMCIRHADYINDDQKVHS
LLTSTINGVKKVLKKHHNDFEMTSFWLANTCRLLHCLKQYSGEEGLMTQNTAKQNEHCLK
NFDLTEYRQVLGHLSIQIYQQLINIAEGILQPMIVSAVLENESIQGLSSVKPMGYRKYSS
SAAGSGNSYSLDEMIRQLNTFHSIMCEQGLDPEIIQQVFKQLYYMINAIALNNLLLRKDV
CSWSTGMQLRFNISQLEEWLRGKNLQQSGAAQTLEPLIQAAQLLQLKKKTSEDAEAICSL
CTSLTTQQIVKILNLYTPVNEFEERVTVAFIRNIQKQLQERNDPPHLLLDFKHMFPVLFP
FNPSAITMDSIHLPASLNLDFLNKV
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcgcagctctacaccaagtacactagggtttggattcctgaccctgatgaa
gtttggagatcagcagaaattgtcaaggattacaaagagggagataaaagcctccagctg
aaacttgaagatgaaactctgtacgaatatcccatcgacctccaagggaatgagctgccc
ttcctgcgcaatccagacatcctggtggggcagaatgacctgacagccctcagctacctg
cacgagcctgcggtcctgcacaacctcaaagtcaggttcctcgagtccaaccacatctac
acctactgtggtatcgtgctggtggccatcaacccctatgagcagctgccaatctacggg
caggatgtcatctacgcctacagcggccagaacatgggggacatggacccccacatcttc
gccgtggccgaggaagcctacaagcagatggccagggatgagaagaaccagtccatcatc
gtgagcggggagtcgggggcgggcaagacggtctccgccaaatacgccatgcgcttcttc
gccaccgtcgggggctccgccagcgagaccaacatcgaagccaaagtcctggcctccagc
cccatcatggaggctattggaaatgctaaaacaacaaggaatgacaacagcagccgcttt
gggaaatacattcagattggctttgataaaaggtaccacatcattggtgccaacatgagg
acgtatctgctggaaaaatctcgggttgtatttcaggcagaggacgagcgcaactaccac
atcttctaccagctctgtgcctcctcaagccttccagaattcaaagaccttggactcaca
tgtgccgaagactttttctacacttctcagggaggtgacacatccatcgatggcgtggat
gatgctgatgactttgagaagaccaggcatgccttcaccctgctcggagtgaaggagtct
caccagatgaccatttttaggataattgctgccattctgcacctggggaacttggaaatc
caaggggagcgagatggggaagcctgcagtgtttcgagcgaggacgagcacctgaacaac
ttctgcagcctgctgggcgtggagcacagccagatgcagcactggctctgtcaccgcaag
ctcgtcaccacggccgagacctatgtgaagagcatgtccctgcaccaggtggtgaacgcc
aggaacgccctggccaagcacatctatgcccagctcttcaactggatcgtgcagcacatc
aacaaggccctgcagaccactgtgaagcagcactccttcatcggcgtgctcgacatctat
gggtttgaaacttttgaagtgaatagctttgagcagttctgtatcaactatgccaacgaa
aagctccagcagcagttcaactcgcacgtgtttaagctggaacaagaagagtacatgaag
gagggaatcccttggactctcatagacttctatgacaaccagccctgcatagacctgata
gaggccaagcttgggatcctggacctgctggatgaagagtgcaaggtgcccaagggcacg
gaccagaactgggcgcagaagctgtacgaccgccacgccgccagccagcacttccagaaa
cctcgcatgtccaacacctccttcatcatcctgcacttcgctgacaaggtggagtaccag
agcgaggggtttctggagaagaacagggacaccgtgtatgaggagcagatcagcatcctc
aaagccagcaagtatcagatggtagcagacttattccaggaggagacggaagctgtgcct
gccactgccgtgcggaagggaacaccccggatcagcgtccgctctgccaggccagccttc
aaagctgccaacaaggagcacaggaaaacagtgggacaccagttccgcaactccctgcac
ctgctgatggagaccctgaacgccaccaccccacactacgtgcgctgcatcaagcccaac
gatgagaaactccccttcaagtttgatccaaagagagcagtgcagcagctgagagcctgt
ggggtgctggagaccatccggatcagtgcagctggcttcccatccaggtggtcctaccct
gactttttcaatagataccgtgtgcttatggacaagagagacctctgtaagaatgacaag
gagcagatctgtcagaccctgttggaagacctcattaaggatccagacaagttccagttt
ggccgtaccaagatctttttccgtgcaggccaggtggcatatctggagaaactgcgggca
gataagttcagagctgccaccatcataatccagaagactgtgcggggctggctgcagagg
gccaagtaccagcggctgagacgagccaccctcaccctgcagtgctatgcccgcaggcac
ctggcacgcaggctttttgagcacctgaggaggacgagggctgccatcatcttgcagaag
cagtaccgaatgctgcggatgcgccaggctttcctgagggtccgcaacgccaccctcacc
atccaggcttttgctcggggcatgtttgtcaggaggatttaccaccagatgctggtggaa
cacaaggccaccatactgcagaagtatgcccggggctggctggcccgcatgcagttccgc
cgggcccgggccgccgccgtggtgctgcagtgccactggcggcgcctcaaggcccggcgc
cagctcaaggccctccgcatcgaggcacgctcggcacagcacctcaagaagctcaacatc
ggcatggagaacaaggtggtgcagctgcagaggaaggtggatgagcagaacaaggagaac
aaacttctgaatgagcagctgtccatgctgacatcagcccactcctctgaggtggagaag
ctgaagaaggagctgcagcagtaccagcagacccagcagggcgatggcaaccagctcctc
agcctgcaggaggagatggagcagctgcggatggagctggagagggctcacggggagagg
gaggtcatggaggatagccacggcaaggagagggacctgctaaggaagcgcatctctgac
ctggaagaagaaaacactctcctgaagcaggaaaaagaggagctgaacagaaggattctc
tgtcaatctgaagatgaatttgcacgaaacacagctgaagaaaatatccagatgaagaaa
gagctggaagaagagaggtctcgttatcagaacctggtaaaagagtatgcaagtctggag
cagagatatgacaacttgagggatgaaatgactattattaagcaaacaccggggcacagg
agaaacccatccaaccagagcagcttggagtctgattccaataacccatccatctgcatg
tctgagatcggggacaccgaggatgtgatacagcaggtggaggagattgggatggagaaa
gcagccatggacatgaccctcttcctaaagctgcagaagcgagtgagggagctcgagctg
gagaggaggaagctgcaagcccagctggagaaaaaggagcaagagatcaagaaatcccag
gtaatcgaaacaaagactgaagtatcttcagaacatgaagattttgcatacaacagcctg
aagaggcaagagctggagtcagagaacaagaagctgaaaaatgagctcaacgagctgagg
aaggccatagcagactatgccacacagaacaactcctccaatgacgtgcaggacagctac
aacctccttctgaaccagctgaaatcggccaacgaggagctggaggtgcgcaaggaggag
gtgctgatcctcaggtcacagatcatgaaggcagcccagcagaaggagacggggaaagac
atggtaaaggagagggagaacatctcccccgatgccagctggcccaacagtgaccggcac
gttgaccaggaggacgcgatcgaagcctaccagggcatgtgtgagaccaaccggctgctg
gaagcacagctccaggaccagagaagggagcatgaggaggagatggaagctctgagaaac
caggtggatttaatgcaagaggagctggagaagcaacagcaggcattcctgcagactctg
cagctctctccagaggtccaggtggagttaggacttcagcaagaaattacacgtctgacc
aatgaaaacctggatcttaaggaattgctggaaaagttggaaaagaatgaaaagaagctg
aagaagcagctgaagatttacatgaagaaggtccaagattttgaagcatcccagacaatg
gtgccagtggagaggaggtcgcatgagcggaacatgcaggttgctgtccagaggaaggag
aaggattttcagggcatgctggaatattacaaagaagatgagccactcctcatccgaaac
ctcattacagatcttaagccccaggcagtgtctgctactgttccctgccttcctgcttac
atcctctacatgtgcatcagacacgcagattacatcaatgatgaccagaaggtgcactcc
ttgctcacctccaccatcaatggcgttaagaaagtgctgaagaagcaccacaatgacttt
gagatgacgtcgttctggctggcgaacacgtgccgcctcctgcactgcctgaagcagtac
agtggggaagagggtctcatgacccaaaacacagcgaagcagaatgagcactgcctgaag
aacttcgacctgaccgagtaccgccaggtgctgggccacctctccatccagatctaccag
cagctcatcaacattgcagagggcatcctgcagcccatgattgtgtctgctgtgttggaa
aatgagagtatccaagggctttccagtgtcaagccgatgggctacaggaagtactcctcc
agtgcggcaggaagtggcaactcctacagcttggatgaaatgattcgccagttgaacaca
ttccacagcatcatgtgtgaacaaggcctggacccagagatcatccagcaggtgttcaag
cagctctactacatgatcaacgccatcgccctgaacaacctcctgctgaggaaggatgtc
tgctcatggagcacgggcatgcagctgaggtttaacataagccagctggaggaatggctg
cgtgggaagaatctgcagcagagtggagcagcgcaaactttggagcccttgattcaggca
gcacagctcctgcagctgaaaaagaaaacctcagaggatgccgaggccatctgctccttg
tgcacgtcactcacgacccagcagattgtaaagatacttaatctctacactcctgtgaat
gagtttgaagaacgtgtgacagtagcattcatacgaaacatacagaagcagttgcaagaa
cggaatgaccctccacatctgctgttagacttcaagcacatgttcccagttctgttccca
ttcaacccatctgccatcaccatggactccattcatctccctgcttccctcaacttggat
tttctcaataaagtctga
DBGET
integrated database retrieval system
